Pairwise Alignments

Query, 813 a.a., outer membrane usher protein from Pseudomonas simiae WCS417

Subject, 844 a.a., export and assembly usher protein of type 1 fimbriae from Klebsiella michiganensis M5al

 Score =  166 bits (419), Expect = 7e-45
 Identities = 202/799 (25%), Positives = 326/799 (40%), Gaps = 61/799 (7%)

Query: 43  SSDSFDPQTLLQRGIDPELASLLMQAPRFTQ--GRHALNLTVNGQRRGRVDVS-IDQHGA 99
           + D FDP  L       + A L   A    Q  G + +++ VN Q   + +V+ +D +GA
Sbjct: 40  AEDYFDPAALEFANPQQKTADLHYFAKSGGQQPGTYPVSIWVNNQEIAQSEVTFVDSNGA 99

Query: 100 TCFDPPLLNAAQL----VTPSSGPA----EESRCYDFLQQY-PQTVIEHDPANLNLNLVV 150
                P L  AQL    V  S+ PA     E   +  +++Y P      D A   LNL +
Sbjct: 100 L---QPQLTPAQLAEYGVNVSAFPAFNTLHEGEPFTHIERYIPDASSRFDFATQRLNLSI 156

Query: 151 PTQALRPVTQ---DISGYQTGGFAALLNYDVTGLYNHYGDDASRFGSANTEVGFNAGDWI 207
           P  A+   ++   D + +  G  AA +NY++TG      DD SR    N   G N G W 
Sbjct: 157 PQAAMNVQSRGYVDPARWDEGIPAAFVNYNLTGSQTRQSDDNSRSSYLNLRSGVNFGAW- 215

Query: 208 VRSRQVQTWQ-DSTSSTTHLDAYAQRTFASHQAVLQAGQINLYNPVLAGAQITGVQVLTE 266
            R R V + + D T        + QR   S +++L+ G       V    Q  GVQ++++
Sbjct: 216 -RLRNVSSMEYDRTRRWNSQSTWLQRDLKSLKSLLRMGDTFTSGDVFDSVQFRGVQLMSD 274

Query: 267 -QALQDQNQG--ATIDGIANGPAQVEVRQNGTLIHSTVVPAGPFSLSSVPRLNGRSDVEV 323
            + L D  +G   TI G+A+  A+V + Q+G +I+ T V  G F++S +       D+EV
Sbjct: 275 DEMLPDSQRGFAPTIRGMAHSNAKVTISQHGYVIYETFVSPGAFAISDLYPTAQSGDLEV 334

Query: 324 TVKESTGEERRFTVP--AAMLGLGLPAPGYSVAAGRVRNIGDGPGAEPWVVSAGWSASPH 381
            VKES G  R FT P  A    L      +S++AGR  + G      P  +         
Sbjct: 335 QVKESDGSVRTFTQPFSAVPFMLREGRVKFSLSAGRYHS-GQSRTPSPTFLQGTLFYGLP 393

Query: 382 PQVSFGSGLLAAEAYRS----AGLSLGLLPWQDSQVQVAVVASEASRRTQERGVQTDLSW 437
            + +   G   A+ Y+S     G   G L         A   + + +R+    ++     
Sbjct: 394 AEFTLYGGSQLAQDYQSWALGVGRGFGELGSLGGDATWANTTTPSGKRSAGHSLRVQYQK 453

Query: 438 SQKLSERWAFTAANSWRTLGYRDLSESTYVVDTREQQRTRYRDQQSATTSWSHPWLGAFS 497
               +      A+  + + GY D SE+   +++R       R ++  + S +   + + +
Sbjct: 454 DFAGTGTSFSLASYRYSSGGYYDFSEAN-ALESRNGLVDNKRSREEISVSQAFGGMSSLA 512

Query: 498 AGVSRSSSFQGDSSSRAL-----ASWGTQIAGMSVSATAEWHMGGRRYNDDSLYLTVSLP 552
                   +   S    +     ++W     G+    T       R+  D S    +S+P
Sbjct: 513 ISAWSQEYWHRQSRDETIHLGFYSAWRGVSWGVGYYYT---QSSDRQKADRSWSFNLSIP 569

Query: 553 LG----ESRRGRAWVRNSGGEHRTGLGLNEQI--NDHLAYRVGVEHDTRDREVESSLGVS 606
           LG    ES    +    + G       L   I  N +L Y +   +    +   SS  + 
Sbjct: 570 LGGPLAESAISYSTTSGNNGRTSQQASLYGSIPRNPNLYYSLQQGYANGGQGSNSSASLD 629

Query: 607 ALPFYSQLDFNYTRSDAERSSYQGGARGAVVLHSDGLTFSPYPVRDTFAVLSVGDMAGIK 666
               Y      Y R D+       GA G++V H  G+T     V ++FA++     A + 
Sbjct: 630 YHGGYGTAQLGY-RQDSASHQLTWGASGSIVAHPHGVTLG-QTVGESFAIVRAPGAADVA 687

Query: 667 VNTPSGPVWTDWQGQAVAPQLSAYGRSPLEVQTRSLPRNADIHNGLAVVSAGRGAVDRIE 726
           +   S  V TDW+G AV P L+AY ++ + + T SL  +AD+      V  G GAV +  
Sbjct: 688 IQNGSN-VHTDWRGYAVVPSLTAYRKNTITLDTESLADDADVELEGQTVIPGGGAVVQAN 746

Query: 727 FGVSLTRRALLTLDT---PMPRGSTVTTEDGEFIT------LVQEGNQVFLSDVLDTRSL 777
           +   +  R L TL     P+P G++V     E         +V +G QV+LS +    +L
Sbjct: 747 YQTHIGNRVLFTLSDSRGPLPFGASVRLRKAEDEQGAAPGGMVADGGQVYLSGIPQEGTL 806

Query: 778 ---WIKAADQPRCHLRFEL 793
              W       +C L F L
Sbjct: 807 DVAWNADNISRKCALHFHL 825