Pairwise Alignments

Query, 219 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 247 a.a., Predicted D-glucarate or D-galactorate regulator, GntR family from Pseudomonas fluorescens FW300-N2E2

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)

Query: 1   MTD--IAPLIK-RSLVDQALEQLRQRISQGIWAIGERLPTEPELSAELGISRNTVREAMR 57
           MTD  ++PL K R L +  +++  QR+  GI   GE+LPTE  +    G+SR+ VREA+ 
Sbjct: 1   MTDQALSPLNKPRRLAETLVDRFAQRMRDGILKCGEKLPTEVHIMEAEGVSRSVVREALS 60

Query: 58  VLAFSGLIEIRQGDGSYLRSMTDP----LGAMRALSHCTLEQAQETRQILEVEAIGLAAL 113
            L  +GL+E R G G+++  M  P    LG     +   +    E R  LEV+A G+AA 
Sbjct: 61  RLQAAGLVETRHGVGTFVLDMPAPEGFTLGPATIATLSDVLSLLEFRLSLEVQAAGMAAE 120

Query: 114 RRTEQDLHRLRAALDTSAALYHGELEA--YISADLVFHQQLVDAAHNPALSELYQYFSSI 171
           R T + L  L  AL+   AL  G  ++   I+AD  FH ++  AA N  L ++ ++  + 
Sbjct: 121 RATPEALAELAQALE---ALLQGPEKSGTTINADFQFHLKIAKAAGNYYLIDIMKHLGTK 177

Query: 172 IGAQLRQTLNLSPRR------QAVFDLHTALLDAVAQQDAERAKS 210
           +  + R     S +       Q +   H  + DA+A  + + A++
Sbjct: 178 LIPRTRMNSAYSGQSDRSAYLQGINAEHQQIFDAIASGNVDAARA 222