Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  458 bits (1178), Expect = e-133
 Identities = 224/365 (61%), Positives = 273/365 (74%)

Query: 1   MSSHTFKPDMPPPNKVFGPMAWMRANLFSSWLNTLLTLLAFYLIYLVVPPILSWAIIDAN 60
           M++H F+P +PPP+   G + W+R NLF+   N++ TL+  YL    +  IL WAI +AN
Sbjct: 1   MATHQFQPSLPPPSNTTGVVGWLRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNAN 60

Query: 61  WVGTTRADCTKEGACWVFIQQRFGQFMYGYYPGDLRWRVDLTVWLAIVGVAPLFISRFQR 120
           W GTTR DCT EGACWVFI  R+ QFMYG+YP    WR  L  +   + VA L   +  +
Sbjct: 61  WSGTTRNDCTLEGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAYEKTPK 120

Query: 121 KAVYGLGFLVLYPIIAFFLLHGGIFGLTNVATSQWGGLMLTLVIATVGIAGALPLGIMLA 180
           +    L F+ +YP  A  LL+GG+FGL  V T +WGGL++TL+IA VGI  +LP+G+ LA
Sbjct: 121 RGWIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALA 180

Query: 181 LGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSSVMLPLFLPEGMGIDKLLRALIGVILF 240
           LGRRS+MP IR +C  +IE WRGVPLITVLFM+SVMLPLFL +G  IDKLLRALIGV++F
Sbjct: 181 LGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVMF 240

Query: 241 QSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNTFIALFK 300
            +AY+AEV+RGGLQAIPKGQYEAA A+GL YW+ MGL+ILPQALK+ IP IVNTFI LFK
Sbjct: 241 SAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFK 300

Query: 301 DTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSIHLEHKLD 360
           DTSLV+IIG+FD+L   + A  DP WLG ATE YVF ALVFWIFCFGMSRYSI LE KL 
Sbjct: 301 DTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYSIWLEGKLH 360

Query: 361 TGHKR 365
           TGHKR
Sbjct: 361 TGHKR 365