Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 384 a.a., ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  392 bits (1007), Expect = e-114
 Identities = 201/367 (54%), Positives = 252/367 (68%), Gaps = 13/367 (3%)

Query: 11  PPPNKVFGPMAWMRANLFSSWLNTLLTLLAFYLIYLVVPPILSWAIIDANWVGTTRADCT 70
           P P+   G ++W+R NLF++  +T LT+++  ++  +VPP + W  IDA W G  R  C 
Sbjct: 18  PAPSLESGAVSWLRKNLFATPKDTALTIISLLILAWLVPPAIQWLFIDAAWSGGGRGVCA 77

Query: 71  K-----------EGACWVFIQQRFGQFMYGYYPGDLRWRVDLTVWLAIVGVAPLFISRFQ 119
                        GACW F+  +F QF++G YP D RWR  L   L ++ + P+ I R  
Sbjct: 78  TLSQGGSQPEGWSGACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLLVPMLIPRIP 137

Query: 120 RKAVYGLGFLVLYPIIAFFLLHGGIFGLTNVATSQWGGLMLTLVIATVGIAGALPLGIML 179
            K +  L  LV  PI++  LL GG FGLT V T  WGGLM+TLV++ VGIA +LPLGI+L
Sbjct: 138 YKGLNALLLLVALPILSAILLPGGWFGLTYVETPLWGGLMVTLVLSFVGIAVSLPLGILL 197

Query: 180 ALGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSSVMLPLFLPEGMGIDKLLRALIGVIL 239
           ALGRRSNMP I+++C  FIE  RGVPLITVLFM+SVMLPLFLP+G+  DK LRALIGV L
Sbjct: 198 ALGRRSNMPVIKMLCTVFIEVIRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALIGVSL 257

Query: 240 FQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNTFIALF 299
           F SAY+AEVVRGGLQAIPKGQYE A ++GL +W+ MG ++LPQALK+VIPGIVNTFI LF
Sbjct: 258 FASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTFIGLF 317

Query: 300 KDTSLVIIIGLFDLLNSVKQAAADPKWLGMAT--EGYVFAALVFWIFCFGMSRYSIHLEH 357
           KDTSLV IIG+FDLL  V+   +D  W    T   G +FA  VFW+FCFGMSRYS  +E 
Sbjct: 318 KDTSLVSIIGMFDLLGIVRLNFSDTNWATAVTPLTGLIFAGFVFWLFCFGMSRYSGFMER 377

Query: 358 KLDTGHK 364
            LD   +
Sbjct: 378 LLDRSQR 384