Pairwise Alignments

Query, 393 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 377 a.a., ABC-type permease for basic amino acids and glutamine from Synechococcus elongatus PCC 7942

 Score =  258 bits (658), Expect = 3e-73
 Identities = 151/375 (40%), Positives = 219/375 (58%), Gaps = 19/375 (5%)

Query: 16  DPKLRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLIDYT 75
           D +L  W++Q++ ++ V     +L +N   NL  RG++  FD+L++SAGF I +  I Y 
Sbjct: 14  DERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAIAYR 73

Query: 76  ESDSYARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRNIP 135
            +DSYAR  V+GL+N+L V  IG+IL T++G + GVA  S NW++ +L+  YV V RN P
Sbjct: 74  TADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVRNTP 133

Query: 136 PLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAIAADGFWPFVVS--IVVAI 193
            LLQ++ WYF + L++P  +   ++  + ++S +G+ +P        WP      +V+  
Sbjct: 134 LLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLP--------WPQTPGWLVVILA 185

Query: 194 VAIVLMARWANKRFEATGVPFHKFWAGLALFIVIPALCALIFGAPLHWEMPKLQGFNFVG 253
           +A+VL   W  +R  +   P    W    L+  I  +  L+    L W   +LQ     G
Sbjct: 186 IALVLFVSWLAQRQRS---PRDWRW----LYGAIAVVTVLMLLTQLSWPQ-QLQPGQIRG 237

Query: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313
           G  L  E  AL L L  YT AFI EI+R GI SV  GQ EAA +LGL    TL ++++PQ
Sbjct: 238 GLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVPQ 297

Query: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373
           ALRVI+P L SQY+  AKNSSLA  +GYP++ +  A T LNQTG+ +EV  I M  YLAI
Sbjct: 298 ALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYAT-AQTTLNQTGRPVEVFLILMLTYLAI 356

Query: 374 SISISLLMNWYNKRI 388
           +  IS  MN   +R+
Sbjct: 357 NAVISAGMNGLQQRL 371