Pairwise Alignments

Query, 487 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas simiae WCS417

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (679), Expect = 1e-75
 Identities = 157/399 (39%), Positives = 226/399 (56%), Gaps = 17/399 (4%)

Query: 100 FHDFKLAPELMHAIQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQ 159
           F    L+  ++ AI++ G+   +PIQ Q +   LAGKD +  AQTGTGKTA F + I+  
Sbjct: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62

Query: 160 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKH 219
           L + P  +   +   RALI+ PTREL  QI  +     ++  L      GG+  + Q++ 
Sbjct: 63  LAKGPKVRANQV---RALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQR 119

Query: 220 LEARHCDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 279
           +  +  DILVATPGRL+D   +  V  D +E++VLDEADRMLDMGFI  + +I++  P K
Sbjct: 120 M-CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178

Query: 280 SERQTLLFSATFTEDVMNLAKQWTTDPSIVEIEAENVASENVEQHIYAVAGADKYKLLYN 339
             RQ LLFSATF+ ++  LAK    +P  + +   N  +  VEQ IY      K  +L  
Sbjct: 179 --RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVK 236

Query: 340 LVNDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRV 399
           LV +  W++V+VF   K    R+   L   G+ AA + G+  Q  R + L  F+ G++R+
Sbjct: 237 LVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRI 296

Query: 400 LVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLP 459
           LVATD+A RGI I  +  V+NF LP++ +DYVHRIGRTGRAG  G +IS     ++ +L 
Sbjct: 297 LVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELF 356

Query: 460 SIE----TLLGRKISCETPPTHLL-------RPVERKRP 487
           +IE     LL R       PT+ L       RP++ K+P
Sbjct: 357 AIERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKP 395