Pairwise Alignments

Query, 487 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas simiae WCS417

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  263 bits (671), Expect = 1e-74
 Identities = 150/375 (40%), Positives = 225/375 (60%), Gaps = 10/375 (2%)

Query: 98  TRFHDFKLAPELMHAIQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISII 157
           T F D  L+ +++ A+ D G+   TPIQ   +   L  +D +G AQTGTGKTA+F++ ++
Sbjct: 2   TNFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPML 61

Query: 158 TQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQL 217
           T LL+    + R    PR LI+ PTREL  Q+A++     K   LN+   +GG+ FD+Q 
Sbjct: 62  T-LLEKGRARARM---PRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQD 117

Query: 218 KHLEARHCDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTP 277
           + LE R  D+L+ TPGRLLD  +RG + +  VE++V+DEADRMLDMGFIP + +I +  P
Sbjct: 118 RKLE-RGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIP 176

Query: 278 PKSERQTLLFSATFTEDVMNLAKQWTTDPSIVEIEAENVASENVEQHIYAVAGAD--KYK 335
               RQTL FSAT   ++  LA ++  +P  +E+   +  +  V Q   A  G D  K  
Sbjct: 177 --FTRQTLFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRA 234

Query: 336 LLYNLV-NDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFRE 394
           +L  L+ +    +  ++F NRK +V  +   L R G +   L GD+ Q  R+  L  F++
Sbjct: 235 VLRELIRSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKD 294

Query: 395 GKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDD 454
           G I++LVA+DVA RG+ I  +SHV NF +P   +DYVHRIGRTGRAG +G + +   + +
Sbjct: 295 GNIKLLVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRE 354

Query: 455 SYQLPSIETLLGRKI 469
           +    +IE L+G+K+
Sbjct: 355 TKFSDAIEKLIGQKV 369