Pairwise Alignments

Query, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 359 a.a., hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score = 89.7 bits (221), Expect = 5e-22
 Identities = 66/178 (37%), Positives = 85/178 (47%), Gaps = 14/178 (7%)

Query: 1172 SYQYDADSRQVVASRGDEPPVRLAYSGEGLELLVEGNKTIRYANGDDQVMALSGGVDGV- 1230
            +Y+YDA  R   +S      V+  Y    L   +EG         +D ++A    VDGV 
Sbjct: 11   TYRYDALDRLASSSPVGRADVQRFYQKNRLATEIEGASRRTVFQHEDLLLAQQRHVDGVV 70

Query: 1231 --QLYANDASGSVRGITAPSEAHVRR-HYTPYGDTTISLDDGKARSMADLQLPGINGQRL 1287
               L A D   SV  +    EA +    Y+PYG      + G         L G NG+R 
Sbjct: 71   DTTLLATDQQRSVLRLV--DEAGIEPVAYSPYGHHPA--ESGLT------SLLGFNGERR 120

Query: 1288 DVATNLYVLGSGVRAYDPRLMIFLQADPLSPFDEGGVNGYGYAACNPTNMMDPSGLWP 1345
            D  T  Y+LG+G RAY+P LM F   D LSPFDEGG+N YGY   +P   +DPSG  P
Sbjct: 121  DPVTGHYLLGNGYRAYNPVLMRFNSPDSLSPFDEGGLNAYGYCGGDPIGFVDPSGHAP 178