Pairwise Alignments

Query, 409 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 408 a.a., spore maturation protein A-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  464 bits (1194), Expect = e-135
 Identities = 243/411 (59%), Positives = 310/411 (75%), Gaps = 5/411 (1%)

Query: 1   MLNGLWLGFFVVAMVSALAQWLVGGNAGIFAAMVESIFAMAKLSVEVMVLLFGTLTLWLG 60
           MLN +WL FF+++++ A+   L  G+  + A  VE++FA AKLS E+ + L G L+LW+G
Sbjct: 1   MLNRVWLVFFLISLL-AIGVQLANGHIEVLANAVEALFASAKLSAEIALGLVGVLSLWMG 59

Query: 61  FLRIAEKAGIVDWLAKALGPLFRRLMPEVPAGHPAIGLITLNFAANGLGLDNAATPIGLK 120
            +RI EKAG+V  +A    PL RRLMPEVP GHPA G +T+N  AN  GLDNAATP+GLK
Sbjct: 60  LMRIGEKAGVVGAIAFIFEPLLRRLMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLK 119

Query: 121 AMKALQELNPIPNTASNAQILFLVLNASSLTLLPVTIFMYRAQQGAADPTLVFLPILLAT 180
           AM+ LQ LNP+   A+NAQILFLVLN SS+TL+PVT+F+YRAQQGAA P  +FLPILLAT
Sbjct: 120 AMQDLQSLNPVTTVATNAQILFLVLNTSSVTLVPVTVFLYRAQQGAAAPADIFLPILLAT 179

Query: 181 SASTLVGLLSVAIMQRLRLWDPVVLAY--LIPGALVLGGFMALLATLSATALAGLSSILG 238
           SASTL GLL+VA +QRL L + VVL Y  +I  ALV  GF   L TL+A A+  +S+ +G
Sbjct: 180 SASTLAGLLTVAFVQRLSLLNAVVLGYGAVILSALVASGF--YLMTLTAEAIGTVSTAMG 237

Query: 239 NLTLFGLIMLFLVIGALRKVKVYEAFVEGAKEGFDVAKNLLPYLVAMLCAVGVLRASGAL 298
           N  L  L+  F+++  +RKV +Y+ F+EGAK GF+ +  L+PYL+AML A+G+LRASGAL
Sbjct: 238 NGILLLLVFSFVLVAGVRKVPIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGAL 297

Query: 299 DFGLEGIRHVVAWTGMDTRFVDALPTAMVKPFSGSAARAMLIETMQTQGVDSFPALVAAT 358
           D+ L+ I   V+  G+DTRFVDA+PTA++KPFSGS ARAM++ETM   GVDSF   +AA 
Sbjct: 298 DYLLQLIAGGVSLFGLDTRFVDAMPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAI 357

Query: 359 IQGSTETTFYVLAVYFGSVGIQRARHAVGCALLAEFAGVVAAIAVCYWFFG 409
            QGSTETTFYVLAVYFGSVGI+  RHA+ C L A+FAG+ AAIAVCYWF+G
Sbjct: 358 FQGSTETTFYVLAVYFGSVGIRHGRHALACGLTADFAGISAAIAVCYWFYG 408