Pairwise Alignments

Query, 409 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 415 a.a., nucleoside recognition domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  359 bits (921), Expect = e-103
 Identities = 188/416 (45%), Positives = 270/416 (64%), Gaps = 13/416 (3%)

Query: 2   LNGLWLGFFVVAMVSALAQWLVGGNAGIFAAMVESIFAMAKLSVEVMVLLFGTLTLWLGF 61
           LN +WL FF+VA V+A  Q +V G+  +F+ M+  +F  A+   E+ + L G + LWLG 
Sbjct: 3   LNLVWLAFFLVAFVTACVQ-VVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLGI 61

Query: 62  LRIAEKAGIVDWLAKALGPLFRRLMPEVPAGHPAIGLITLNFAANGLGLDNAATPIGLKA 121
           +R+ E+AG+VD  A+ + P+ R L P VPAGHPA G + +N +AN LGLDNAATP+GL+A
Sbjct: 62  MRVGERAGVVDLFARLVNPVMRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQA 121

Query: 122 MKALQELNPIPNTASNAQILFLVLNASSLTLLPVTIFMYR----AQQG-----AADPTLV 172
           M+ LQ++NP P  AS+AQ++F+VLN + +TL+P ++   R     +QG     AAD   +
Sbjct: 122 MRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAIRQAMAVKQGLVGFNAAD---I 178

Query: 173 FLPILLATSASTLVGLLSVAIMQRLRLWDPVVLAYLIPGALVLGGFMALLATLSATALAG 232
           FLP LL+T      G+ +VA  QR+ L+ P +LAY       +G   A L       +A 
Sbjct: 179 FLPTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVAAMGLLFAWLRQFPPQQMAA 238

Query: 233 LSSILGNLTLFGLIMLFLVIGALRKVKVYEAFVEGAKEGFDVAKNLLPYLVAMLCAVGVL 292
              ++G   +  +++ FLV GA R++ VYE FV+GAK+GF VA  ++PYLVA+L  + V 
Sbjct: 239 WIGLIGAGAILTIVVAFLVCGAFRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVF 298

Query: 293 RASGALDFGLEGIRHVVAWTGMDTRFVDALPTAMVKPFSGSAARAMLIETMQTQGVDSFP 352
           RA+G +D  ++G+  +    G+DTRFV ALP  ++K  SG+ AR ++++ M T GVDSF 
Sbjct: 299 RAAGCMDVLMQGLSALFTHLGIDTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQ 358

Query: 353 ALVAATIQGSTETTFYVLAVYFGSVGIQRARHAVGCALLAEFAGVVAAIAVCYWFF 408
             +AA IQGSTETTFYVLAVYFGSVGI+  R+A+ C L A+  G+V A+ V Y FF
Sbjct: 359 GKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLIGLVGAVLVAYLFF 414