Pairwise Alignments

Query, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 2e-50
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 7/287 (2%)

Query: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRAL 70
           L LL F L   +   IN+ KV E++ CP L  +P  H  VKG+A +RG +++VID+S A+
Sbjct: 20  LELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAV 79

Query: 71  GEMPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFITGVTQ 130
           G  P  D D   +++ + +R+ Q   V +V +I++     I PPP G+G +  ++T VT 
Sbjct: 80  GGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSN-YLTAVTN 138

Query: 131 VEGGLVQVLDIEKVIHGIAPAPIE---AAPTDLTMEEAEVLGNARILVVDDSQVALQQSV 187
           ++  LV+++D+EK++  I P   +   +    +   E E     RIL+ DDS VA +Q  
Sbjct: 139 IDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVARKQVQ 198

Query: 188 HTLRNLGLTCHTARSAKEAIDVLLEL--QGTV-EQINVVVSDIEMSEMDGYALTRTLRET 244
             + ++G    T +  K+A + LLE+  +G +  QI++V+SDIEM EMDGY LT  +R  
Sbjct: 199 RAIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAEIRRH 258

Query: 245 PDFQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLVVA 291
            + + LYV+LH+SL    N       GA+A + KF+  EL   +  A
Sbjct: 259 NELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELGNAVKAA 305