Pairwise Alignments

Query, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 299 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  191 bits (486), Expect = 1e-53
 Identities = 108/293 (36%), Positives = 170/293 (58%), Gaps = 3/293 (1%)

Query: 8   ADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLS 67
           + S  LLLF L   ++ A+  LK+ E++P  PL K+P+SHP + G AT+RG+++ V+D++
Sbjct: 6   SQSQGLLLFRLSQTQVFALGTLKIRELVPYTPLSKIPQSHPTIMGAATIRGHTIPVVDMA 65

Query: 68  RALGEMPLADPDGG--CLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFI 125
            A+G  P++D +     +I+TD  R   G  V+A+ KI+ C   DI  P    G N AF+
Sbjct: 66  AAIGYRPISDEERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANLGRN-AFL 124

Query: 126 TGVTQVEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNARILVVDDSQVALQQ 185
           TGVT+ +  LVQ+LD+E ++  + P   EA    LT  + E L   RIL+VDDS+VA +Q
Sbjct: 125 TGVTRYDNQLVQLLDVELLLSKVFPDAPEANRAILTDVQREKLKPMRILLVDDSKVARKQ 184

Query: 186 SVHTLRNLGLTCHTARSAKEAIDVLLELQGTVEQINVVVSDIEMSEMDGYALTRTLRETP 245
               L ++ +        KEA+ ++ +       I+++VSDIEM  +DGY L   +R+ P
Sbjct: 185 LSDALDSINIPYFVTPDGKEALSIMEQAAAEHHPIDILVSDIEMPGLDGYELAFEVRDNP 244

Query: 246 DFQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLVVAAQTVAQK 298
                Y++LHTSL S ++  +A   GA+  LTKF + EL + ++  A   A +
Sbjct: 245 LLAKAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAMLRGADLAATR 297