Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 324 a.a., D-alanine--D-alanine ligase from Caulobacter crescentus NA1000

 Score =  182 bits (463), Expect = 7e-51
 Identities = 124/309 (40%), Positives = 161/309 (52%), Gaps = 11/309 (3%)

Query: 13  APADFGRVAVLFGGKSAEREVSLKSGNAVLDALQSAGVNAFGIDVGDDFIARLQAEKIDR 72
           AP     +AVL GG S+ER+VSL SG A  +AL+  G     ID G D    L A K D 
Sbjct: 9   APLAGRHIAVLLGGPSSERKVSLVSGAACAEALERLGAKVSRIDPGPDVAQVLAATKPDM 68

Query: 73  AFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVL 132
            F  LHG  GEDG +QG+LE   +PYT SGVLASALAMDK + K V  + G+  P   + 
Sbjct: 69  VFNALHGEWGEDGCVQGVLETLKLPYTHSGVLASALAMDKAKAKAVLAAAGVTVPGGGLF 128

Query: 133 CSEDDCISAAKELGLPLIVKPAHEGSSIGMAKVNSAAEL--IDAWKAASTYDSQVLVEQW 190
              D  ++    L  P +VKP  EGSS+G+  +   A     +    + T+  +V+VE +
Sbjct: 129 NRHD--VARDHVLQPPYVVKPNAEGSSVGVFIIKEGANRPPEEVGAPSWTFGEEVMVEPY 186

Query: 191 IQGPEYTIATLRGQVLPPIALGTPHT-----FYDYDAKYLASDTQYRIPCGLDASKEQEL 245
           IQG E  +A L G+   P AL          FYDY+AKY    + + +P  +  +     
Sbjct: 187 IQGMELAVAVL-GESNGPRALAVTDIRASTGFYDYEAKYSEGGSIHVLPAPIPNAVRDRA 245

Query: 246 MDLTAKACEALGIAGWARADVMQDDQGDFW-FLEVNTAPGMTDHSLVPMAARAAGLDFQQ 304
           M +   A  ALG  G  R+D   DD  D    LEVNT PGMT  SL P  A   G+ F Q
Sbjct: 246 MRMAELAHTALGCRGVTRSDFRYDDINDLLVLLEVNTQPGMTPTSLAPEQADHVGIPFDQ 305

Query: 305 LVLAILADS 313
           LVL I+ D+
Sbjct: 306 LVLWIVEDA 314