Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dechlorosoma suillum PS

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 79/269 (29%), Positives = 114/269 (42%), Gaps = 24/269 (8%)

Query: 119 IAVAGTHGKTTTTSLIASVFAA----GGLDPTFVI----GGRLNAAG---------TNAQ 161
           IAV G++GKT+T  +IAS+  A     G DP  V+    G   N  G         T  +
Sbjct: 107 IAVTGSNGKTSTKEMIASILQAQAVLDGYDPAMVVLATQGNFNNDIGLPLTLLKLRTTHR 166

Query: 162 LGTSRYLIAEADESDASFLHLQPLVAVVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFY 221
            G     +    E        QP VA+VTN    H+    GD  ++ +        L   
Sbjct: 167 SGVIEMGMNHPGEIGYLTRLAQPTVALVTNAQRAHLEGM-GDLQQVAEEKATIYAGLKPG 225

Query: 222 GLAVVCLDDPVVREILPL-VKRPTVTYGFSEDADVRAINVRQEGMQTFFTVLRPDREPLD 280
           G+A+V  DD        +  +R  VT+G  + ADV    V+  G++T   +  P      
Sbjct: 226 GVALVSADDAFAAYWKGVNERRRVVTFGLDKPADVGG-KVQLHGLETRIDLTSPKGNAA- 283

Query: 281 VSVNMPGNHNVLNSLATICIATDEGVSDEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVML 340
           + + +PG HN  N++A    A   G+S  A+V GL  F GV  R Q   Q     G V+L
Sbjct: 284 IRLRVPGLHNARNAVAAAAAALAGGISLAAVVGGLESFRGVKGRLQ---QRQAAAGAVIL 340

Query: 341 VDDYGHHPTEVAAVIKAVRGGWPERRLVM 369
            D Y  +P  V A I  +      + LV+
Sbjct: 341 DDTYNANPDSVRAGIDVLAATVGRKILVL 369