Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 452 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Klebsiella michiganensis M5al

 Score =  325 bits (834), Expect = 1e-93
 Identities = 199/452 (44%), Positives = 267/452 (59%), Gaps = 7/452 (1%)

Query: 5   MKFSELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAV 64
           +  S+L       +  SD + + V+ D+R +  G LFVAL G RFD HD+  +  A GA 
Sbjct: 4   LTLSQLADITRGELHGSDVAIEDVTTDTRKVTAGCLFVALKGERFDAHDFAEQAKAAGAG 63

Query: 65  GALVQRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVL 124
             LV R +A   LPQ++V DTRLA G+L A  R      V A+TGSSGKT+VKE+ A +L
Sbjct: 64  SLLVSRRLA-CDLPQVVVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAIL 122

Query: 125 RTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVIN 184
              G    T GNLNND G P+TLL L  E+  AVIELGA+  GEIA+TV+LT+P   ++N
Sbjct: 123 SQCGNTLYTAGNLNNDIGVPMTLLRLTKEYDYAVIELGANHQGEIAWTVSLTRPEAALVN 182

Query: 185 NAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRKVLTFAVL 244
           N   AH+  FG  E + +AKGEI  GL  +GIA++N D+  +  W+     RK   F+  
Sbjct: 183 NLAAAHLEGFGSLEGVAKAKGEIYTGLPLNGIAIMNADNNDWLNWQSVIGDRKTWRFSPN 242

Query: 245 NAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLF 304
            A +DF A+N+ V + G   FTL TP G+  V L L G HN+ANALAAAA + A+G +  
Sbjct: 243 AANSDFTATNVHVTSHG-TEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMAVGATHE 301

Query: 305 GIATGLGAVQPVKGRTVAQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRKVLVLGDI 364
            I  GL  ++ V GR      T+   ++DD+YNAN  S+ AA+ +L    G +VLV+GD+
Sbjct: 302 AIKAGLKDLKAVPGRLFPIQLTDSQLLLDDSYNANVGSLTAAVQVLSEMPGYRVLVVGDM 361

Query: 365 AELGDWAEQSHREVG-AYAAGKVDALYAVGPNMAHAVSVFGPGARHFVTQAELIQALTA- 422
           AELG  ++  HR+VG A  A  +D + +VG   A      G G  HF  +  L+  L A 
Sbjct: 362 AELGAESQACHRQVGEAAKAAGLDRVLSVGSLSAEISGASGVG-EHFNDKVLLVTRLQAL 420

Query: 423 -AEHDKHTTILIKGSRSAVMENVVAALCGSST 453
            +EH K  TIL+KGSRSA ME VV AL  + T
Sbjct: 421 LSEH-KIMTILVKGSRSAAMEVVVRALQENGT 451