Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 452 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Enterobacter sp. TBS_079

 Score =  340 bits (873), Expect = 4e-98
 Identities = 204/453 (45%), Positives = 272/453 (60%), Gaps = 7/453 (1%)

Query: 4   AMKFSELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGA 63
           ++  S+    L   +L  D + + V+ D+R + PG LFVAL G RFD HD+  +    GA
Sbjct: 3   SITLSQAAAVLQGELLGHDLTIEAVTTDTRKVTPGCLFVALKGERFDAHDFAQQARENGA 62

Query: 64  VGALVQRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGV 123
              LV R +A   LPQ++V DTRLA G+L A  R      V A+TGSSGKT+VKE+ A +
Sbjct: 63  GALLVSRKLAVD-LPQIVVKDTRLAFGELAAWVRQQVPTRVVALTGSSGKTSVKEMTAAI 121

Query: 124 LRTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVI 183
           L   G    T GNLNND G P+TLL L  EH  AVIELGA+  GEIA+TV+LT+P   ++
Sbjct: 122 LSQCGNTLYTAGNLNNDIGVPMTLLRLTKEHEFAVIELGANHQGEIAWTVSLTRPEAALV 181

Query: 184 NNAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRKVLTFAV 243
           NN   AH+  FG  E + +AKGEI  GL   GIA++N D+  +  W+     RK   F+ 
Sbjct: 182 NNLAAAHLEGFGSLEGVAKAKGEIYTGLPEDGIAIMNADNNDWLNWQQIIGSRKTWRFSP 241

Query: 244 LNAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSL 303
             A +DF A+NI V + G   FTL+TP G   V L L G HN+ANALAAAA + A+G S 
Sbjct: 242 NAANSDFTATNIHVTSHG-TEFTLNTPTGGIEVLLPLPGRHNIANALAAAALSMAVGASH 300

Query: 304 FGIATGLGAVQPVKGRTV-AQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRKVLVLG 362
             I TGL  ++ V GR    QLA N + ++DD+YNAN  S+ AA+ +L    G +VLV+G
Sbjct: 301 QAIKTGLANLKAVPGRLFPIQLAENKL-LLDDSYNANVGSMTAAVQVLSEMPGYRVLVVG 359

Query: 363 DIAELGDWAEQSHREVG-AYAAGKVDALYAVGPNMAHAVSVFGPGARHFVTQAELIQALT 421
           D+AELGD +E  H +VG A  A  +D + + G  ++ A+S       HF  +A LI+ L 
Sbjct: 360 DMAELGDESEACHVQVGDAVKAAGIDCVLSAG-KLSQAISHASGVGEHFADKAALIERLK 418

Query: 422 AAEHDKH-TTILIKGSRSAVMENVVAALCGSST 453
           A   +K   T+L+KGSRSA ME VV AL  + T
Sbjct: 419 ALMTEKQIVTVLVKGSRSAAMEEVVHALQENGT 451