Pairwise Alignments

Query, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas simiae WCS417

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  372 bits (954), Expect = e-107
 Identities = 211/469 (44%), Positives = 282/469 (60%), Gaps = 7/469 (1%)

Query: 16  LLIRELSLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVAYEVEGATVLPITD-- 73
           L+I  L LDSR +++GD F+A+ G   DGR  I  A+ +GA  V  E +   +    +  
Sbjct: 42  LVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYR 101

Query: 74  --VPLIPVKGLAAQLSDIAGRFYGDPSRQVNLIGVTGTNGKTSVTQLIAQALDLLGQHCG 131
             VP+I +  L   LS++AGR YG    Q  LIGVTGTNGKT++TQLIAQ L+LLG    
Sbjct: 102 AGVPVIYLAELGQHLSELAGRLYGGHHNQ--LIGVTGTNGKTTITQLIAQWLELLGHKAA 159

Query: 132 IVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHGLHQGRVAALAF 191
           ++GT G GF  AL+   +TT N + +QATL DL + GA+  A+E SSHGL QGRV  L F
Sbjct: 160 VMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHF 219

Query: 192 DVAVMTNLSRDHLDYHGTMEAYAAEKAKLFAWNDLKCRVVNLDDAFGRQLAAEDRESRLI 251
              V +NLSRDHLDYHGTMEAYAA K  LF+ +  +  ++N+DDA G Q   +  ++  +
Sbjct: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAIGV 279

Query: 252 SYSLEDASAY-LYCREAQFNDEGVRATLVTPQGEHHLRSSLLGRFNLSNTLAAVGALLGL 310
           S   +  +A  ++ RE  + + G+     +  GE  L + L+G FN  N L A+  LL L
Sbjct: 280 SLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSL 339

Query: 311 EYALDEILRVLPKLEGPVGRMQRLGGGKQPLVVVDYAHTPDALEKVLVALRPHAKGKLLC 370
            +    +L   PKL   +GRM+     ++  +VVDYAHTPDALEK L ALR H  G+L  
Sbjct: 340 GFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLWA 399

Query: 371 LFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRVGFKDVSKATFVA 430
           + GCGGDRDRGKRP+MA I E+ AD V++TDDNPRSE P  I  D+  G     +A    
Sbjct: 400 IVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHIEH 459

Query: 431 GRGVAIAQLIASAGADDVVVLAGKGHEDYQEINGERHAFSDLVEADHAL 479
            R  A +  +  AGA D+++LAGKGHEDYQ +  E   +SD   A   L
Sbjct: 460 HRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLL 508