Pairwise Alignments

Query, 257 a.a., cell envelope biogenesis protein OmpA from Pseudomonas simiae WCS417

Subject, 212 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

 Score = 92.8 bits (229), Expect = 5e-24
 Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 28/234 (11%)

Query: 1   MFTSRRLLVVATCVALLSGCASPNPYDGSSQGQASNESGGMSKTAKYGGLGALAGALAGA 60
           M T R  + V      L+GCA     D  +                   +G + GA  GA
Sbjct: 1   MSTLRTAVPVIVMTTFLAGCAGVQKQDWPT----------------CAAVGGVTGAALGA 44

Query: 61  AIDHNNRGKGALIGAVVAGAGAAGYGYYADQQEKKLR-----ESMANTGVEVQRQGDQIK 115
               +  G GALIG    G  AA Y +    +E+ +      E M  +  E +   + ++
Sbjct: 45  IESSSYAGWGALIG----GGVAAAYCWANGMEEETVAVVETVEPMPQSQPEPEPASEPVR 100

Query: 116 LIMPGNITFATNSDAISSSFYLPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQR 175
           + +  ++ F  + D +    Y  + NLA+ +K++ Q T  + G+TDS G+   N  LS+R
Sbjct: 101 VEL--DVKFDFDRDVVKQDSYGDIQNLADFMKEYRQTTTVLEGHTDSVGTDAYNQRLSER 158

Query: 176 RAQSVANYLTSQ-GVNGANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGPIP 228
           RA++V   L +Q GV G+ +++ G G   P+A NA   GRA NRRVE  +   P
Sbjct: 159 RAKAVREVLVNQYGVEGSRVNSVGYGESRPVADNATEEGRAINRRVEAEVEARP 212