Pairwise Alignments

Query, 909 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 2e-48
 Identities = 219/927 (23%), Positives = 391/927 (42%), Gaps = 72/927 (7%)

Query: 18  LEGRFYRPPLPDGYVLRPRLCERLSAGLEGRLLLVSAPAGFGKSSLAVEFCQSLPAHWQS 77
           +  +  RP      ++RPR+ + L      +L+L  +PAG+GK+++A ++    P     
Sbjct: 22  IPSKLTRPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKP---NL 78

Query: 78  LWLGLSPRDNDPGRFLERLLDGLQQFFPQLGAQSLGLLKMRQRHQPFAFEEWLDGLLDEL 137
            W  +   DNDP RF+  LL  + +        +  L + RQ          L  L  E+
Sbjct: 79  GWYSIDDSDNDPFRFMNYLLQAINKATHNACPNAQKLAEKRQFSS-------LHSLFSEV 131

Query: 138 AVHLST-RAPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLVVLVTSRQRPDWHLARLRL 196
              ++       +VLDDYHL     +   ++FFL H+PD L ++VTSR  P    A LR+
Sbjct: 132 FAEMADYHGECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRV 191

Query: 197 SRHLLELHEQDLRLTHDESLAVLD-RHSNSLQGEALDNLIRRSEGWVAGLRFWLLAASEA 255
              ++E+  + L    +E+    + R S+ +     ++L    EGW + ++  L+A    
Sbjct: 192 RDLMIEIGNELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQ--LIALQAQ 249

Query: 256 GGDGALPQSL----HGGEGLIRDYLLEEVIDCLPADVQAFLYDTAPQDRFCSELCDAVRE 311
                L Q++    H     + DYL+EEV D L  + + FL   +  D F   L  ++  
Sbjct: 250 HQHRTLAQTIESVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTG 309

Query: 312 AHDSAEILRYLQAHQVFLVPLDDQGHWYRYHHLFSDLLRTRRASSHVLPAASLHLRACR- 370
             D+  ++  L    +F+ PL+ + +WYR+H+LF++ L  +R +        L   A + 
Sbjct: 310 RDDALAMIESLNRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKA 369

Query: 371 WFNAQGLIDEAVEQALRAGHLDVAANLVQNLSEE---QLLAEQNVGMLLRWKMDLPDSLL 427
           W  A      A  QALR  HL     L+ ++  +   ++  +  + +L      L    L
Sbjct: 370 WLEA-----AAPHQALRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQL 424

Query: 428 ISTPRLIVLYSWALGLACQLDAAEELSSYLSRFLPAPSATAQKSMLAQWLALSGIIARGR 487
              P+L +L +W      + +    L +  ++ + A +         ++ AL   +A  +
Sbjct: 425 YREPKLCMLQAWLAQSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQ 484

Query: 488 GDRELTQRYCSEALESLPQRRYGQRLMCLSTLSNLAIVDADLWRARGLNRESLELAQRVG 547
            + E        AL  L    Y  R++  S +  +  V   L RA  + +++ +LA++  
Sbjct: 485 NEPEKALELAELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQ 544

Query: 548 NPLFEALAHYDRARVLQARGEILRSLDEVRQGLQRLHGLAPQRLYAVRARLSLYEGFLLL 607
                  A   ++ +L A+G + ++  EV+    +L  +  Q+L+ V     L+E FLL 
Sbjct: 545 VYHQALWALLQQSEILLAQGYV-QAAYEVQDNAFKL--IEEQQLHQV----PLHE-FLLR 596

Query: 608 VRLQPDAGLARLRAGLAEARACRDISVLIGH---------CVIANFEGRRGDFPKAFAEL 658
           +R Q      RL    AE  A + +SVL  H          ++A     RG+  KA   +
Sbjct: 597 IRAQILWCWNRLDE--AEQAAYKGLSVLENHSQSKHLHCYSMLARIAIGRGELDKAGRFI 654

Query: 659 AEAERLM-----HI-WDVPP-----IYYLAMITLIKCELWL-AQGRTDLADAWLTRL--- 703
            + + L+     H+ W         +Y+       +   WL +  R D A    ++L   
Sbjct: 655 EQIQHLLKQSTYHVDWTANASLSLLLYWQVKENSTEIRQWLQSSTRPDKACNHFSQLQWR 714

Query: 704 ----GQTYHGEHAAAAPEFHPHLPQHIGLQQAALDATRHQPAAALQRLEE-LALQAHNSG 758
                Q   GE + A       + +     Q   D  R+    AL  + E   LQA +  
Sbjct: 715 NIARAQIQLGELSEARHTL-DFIQEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKL 773

Query: 759 RQMIALMALTQRVQLLLEEGQETKARSVFTQALEAGIGGALQPFQRLLETHPDWMREQLA 818
           +Q + L   T  +   L +G  +K   +  + +  G  G L+  +  L    +    Q +
Sbjct: 774 KQALRLTNQTGMIGNFLIDG--SKIGHLLEKLVHKGELGDLERHRAHL-LLKEISTTQRS 830

Query: 819 KDPHGLLSQSLLALLPAVVVVEAASTHETLSARELAVLQLIAQGCSNQEISNRLFISLHT 878
           +  H    +  +  L     +        L+ RE  VL LI  G SN++I++ L ++  T
Sbjct: 831 RSIH--FDEEFVEKLVNHPNIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTT 888

Query: 879 VKTHASHINSKLGVERRTQAVARAQEL 905
           +KTH  ++  KL +  R +AV  A++L
Sbjct: 889 IKTHIRNLYQKLNIANRKEAVQTAEQL 915