Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  160 bits (405), Expect = 1e-43
 Identities = 147/547 (26%), Positives = 246/547 (44%), Gaps = 60/547 (10%)

Query: 28  ARYEKTRE-IVYRDK-LRYTYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECM 85
           A+ +  RE +VY D+ LR+TY    ER   LA  L E G+K GD + +   +   +L  M
Sbjct: 16  AQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFM 75

Query: 86  FAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEF-----VGLYQAIAGHLTTVD 140
           FA   IG V+ T+N      ++ Y M  ++ + + +   F     + +   +   L T  
Sbjct: 76  FATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQ 135

Query: 141 KTLLLTD-----------------GDSKTAELPNLVGEYESLLAAASPKYDFQDFDENSV 183
           +  L ++                 G   T EL  L+G Y S       K   +  D + V
Sbjct: 136 RGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELM-LLGNYVSDEKLIEAK---KGLDSDDV 191

Query: 184 ATTFYTTGTTGNPKGVYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVHA 243
               YT+GTTG PKGV  TH+ ++ +   +       +  RL       +P+ P+FH   
Sbjct: 192 INMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLC------LPV-PLFHCFG 244

Query: 244 WGLPYVATML-GLKQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFG 302
             L  +A +  G   V    +DP  ++   +KEK T  + VPT+     +    +  D  
Sbjct: 245 IVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLS 304

Query: 303 GWKI-VIGGS-----ALNRTLYEAAKARGIQLTAAYGMSETGPLVSCAHLNEELMAGTED 356
             +  ++ GS     A+ + + +       ++T +YG++E  P+ +   +++      E 
Sbjct: 305 SLRTGIMAGSTCPIEAMKKVMSDMYMR---EITISYGLTEASPVFTMTSVDDPFEKRVES 361

Query: 357 ERITYRIKAGVPGPLVEAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAE-L 415
                    G   P  E  I+D E     A G + GE+  R   + +GYY  P+K AE +
Sbjct: 362 --------VGKAMPHCEVKIIDPETGETLAPG-NVGEICCRGYNVMKGYYKMPEKTAEVI 412

Query: 416 WAGGWMHTGDVATLDAFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGI 475
              GW+H+GD+A  D  G   I  RIKD+I  GGE I    +E+ +   P + +  VVGI
Sbjct: 413 EKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGI 472

Query: 476 ADPQWGERPFALLVVRDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVG 535
            D ++GE   A ++ ++G+     E+KE       L  ++++ +P  + VV E P T+ G
Sbjct: 473 PDEKYGEIVGAFVIPKEGY-----EIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASG 527

Query: 536 KLDKKRI 542
           K+ K ++
Sbjct: 528 KIQKFKL 534