Pairwise Alignments

Query, 332 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 401 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 29/285 (10%)

Query: 63  VPERAFDAAVIFLPKSKDLTDYLLNAVAARLPAAELFLVGEKKAGIESAAKQMIPFGKPR 122
           +P +  +  ++ LPK+ +   + L  ++  L       +G K   I  A  + I     +
Sbjct: 107 LPPQGINLVLMKLPKNLNYFIHQLQRLSQSLAPNTPVYIGAKAKSINKALLETIA----K 162

Query: 123 KLDNARHCQLWQVT-VANAPQAVELESLAQVFEVPLAEGPLKVLSLPGVFSHGRLDRGTE 181
            L  A     W+ T V       +  +L       + E  L + +L  VF+  +LD G  
Sbjct: 163 HLGPASASLAWKKTRVITCIADGKPRALPSEVSWAVKEFNLSISNLSNVFAANKLDIGAR 222

Query: 182 LLLEHLDKLPSGH---LLDFGCGAGVLGAAVKRRYPHNTVTMLDVDAFAAASSRLTLAAN 238
           ++L   D LP GH   ++D GCG G+LG   K+ YP+  V  +D    A  S+R    AN
Sbjct: 223 IML---DNLPEGHFDTIVDLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSARQNWQAN 279

Query: 239 GLE-------------AEVLTGDGIDAAPMGLNAILSNPPFHVG-VHTDYFATENLLRKA 284
            L+              + LT  G +  P   + +L NPPFH G   TD+ A +  L  A
Sbjct: 280 KLDNPEQAKPQGHFHWDDCLTHLGDEVKP---DLVLCNPPFHQGEAITDHIAWQMFL-DA 335

Query: 285 AKHLAKGGELRLVANSFLKYQPLIEEHLGVCAIKAEGNGFRIYRA 329
              L  GG L++V N  L Y   ++     C   A    F I RA
Sbjct: 336 FHQLRPGGMLQVVGNRHLGYHVKLKRIFKNCETAASNGKFVILRA 380