Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  321 bits (823), Expect = 7e-92
 Identities = 207/737 (28%), Positives = 379/737 (51%), Gaps = 43/737 (5%)

Query: 1   MKFKSIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALA 60
           +  KSIQ  +A   G  +L+   +L+ Y+++  + TQ++V  R   Q ++   Q L  L 
Sbjct: 2   ISLKSIQQRIAITGGLCLLATAGILIGYSVYLASTTQQLVSGRVSQQAQEDALQTLQHLG 61

Query: 61  QTQATLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKI 120
              A  I+ E    L  A+ +AT  A+ G   +     LQ+ R+++ ++L   +   P  
Sbjct: 62  GKYAGEIRSEFTEALEAARGMATTFAV-GKSGSTNSGGLQIGRDEVNSILLNVLKSQPDF 120

Query: 121 LGAYIGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLADVNDQNILS 180
            G Y  WEP+AID  D  + +         GRF P+W R ADG + +  L + +  +   
Sbjct: 121 NGTYSCWEPDAIDGQDFLFTDGQNGNNGQTGRFTPYWTRGADGKIAVQPLVEYDTMDKHP 180

Query: 181 TGVRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNF 240
            GV    +Y+  +E  K   + P PY V    V LA+   PI++DG F G+ G D +++F
Sbjct: 181 NGVLKGGWYIGPRETLKESVLGPLPYIVQGKQVWLATLSVPIIVDGRFTGVAGTDYNLDF 240

Query: 241 IQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAG 300
           +Q +      KL++G GE+A+IS  G +VA ++  + +G+    +L     T L  ++ G
Sbjct: 241 VQQISQEVSAKLFDGQGEVAIISDQGLIVAESRFPNLIGQHFQKVLPDGWQTALTSVQKG 300

Query: 301 EVRYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFG 360
           E    +D ++G + +F P  +G+    W++ML++    V+A + +L+++++AQ    +  
Sbjct: 301 EELARLD-DNGMVVVFAPIELGRTGKPWSMMLKIDKEIVLAKATELKAEMDAQSARSMLQ 359

Query: 361 MTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIA 420
              AG+LI+ + ++ +W+    +A P+++   +   I   +GD ++R+    ADE+G ++
Sbjct: 360 QIGAGVLISLLAVIALWISSRALALPIRKAAQLAGAIQ--KGDFSQRMAHQSADEVGQLS 417

Query: 421 NGFNTFLIKLQGM------ITQVVSSVQKVSDSSEHTADIAIRTN-QGVHKQMVEIDQVA 473
              +     LQ        I+Q   +V+    S +    +A+R     ++  + ++ Q +
Sbjct: 418 ASLDRMADSLQEQVHVAERISQGDLAVEVRLASEQDQLGLALRRMVDNLNGLVSQVQQSS 477

Query: 474 TAVHE----MTATAQDVARNATQAAQAASHADQAASQGMRIVRDTS---TSIGALA---- 522
             +++    +T  +QD++  AT++A A +      +Q    +R TS   +   AL+    
Sbjct: 478 ELINDKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASEANALSRNSE 537

Query: 523 -------EEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGR 575
                  E +    + +Q + +   +I  I+ AI  IA QTNLLALNAAIEAARAGE GR
Sbjct: 538 HSARSGNELMVSLKAAMQEINQSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEHGR 597

Query: 576 GFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAE 635
           GFAVVADEVR LA ++ +A +                 R++++S +RT + ++     A 
Sbjct: 598 GFAVVADEVRQLAARSAEAAQR--------------STRLIQESNARTIKGMEITDDTAR 643

Query: 636 ALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASAD 695
           ALE I Q  + ++ +  +IASA+ +Q++  E +++ +  I +V +  +  +++S+ A+ +
Sbjct: 644 ALEAIVQGAAQVSQLVDEIASASSQQASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAAQE 703

Query: 696 LTKLAEQQRRLINQFKV 712
           LT+ A+Q    + +FKV
Sbjct: 704 LTQQAQQMIVQVGRFKV 720