Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  382 bits (980), Expect = e-110
 Identities = 234/713 (32%), Positives = 386/713 (54%), Gaps = 9/713 (1%)

Query: 1   MKFKSIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALA 60
           M+  S+Q+ +  LAG  ++     L+ ++++    +Q+  + ++        +Q L   A
Sbjct: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60

Query: 61  QTQATLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKI 120
              AT I   L   +  A+ LA     L     +     +V R  L  ++ ++V+    I
Sbjct: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120

Query: 121 LGAYIGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLADVNDQNILS 180
            GAY+ + PN +D  D+ YVN+  VG    G+F  +W + A+G    + ++ V  Q  L 
Sbjct: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQ---NVISRVLTQAQL- 176

Query: 181 TGVRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNF 240
           T     E ++C  E    C   P   +      +  S   PI+IDG   G  G DL++  
Sbjct: 177 TEESNKERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAP 236

Query: 241 IQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEK-ASDLLDSNELTNLNQLKA 299
           +  +   +D  L++G G+++++S N  LVA       LGE   S+ L  + +++L  L+A
Sbjct: 237 LIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSL--LQA 294

Query: 300 GEVRYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIF 359
           G+V     ++   + +F P  +  A+  W ++ ++P  +VM D+++L   L  Q +  I 
Sbjct: 295 GQVNTQWSEDGQWLVVFAPIKV--ANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIR 352

Query: 360 GMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAI 419
              + G L+  +GLLV+ L+   + RP++ +   L DI+ GEGDLT+RL  + ADE+G +
Sbjct: 353 SELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQL 412

Query: 420 ANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEM 479
           A GFN F+ KLQ +I +VV +  +V  ++E        T +    Q  E+D VATA  EM
Sbjct: 413 AQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEM 472

Query: 480 TATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDS 539
           T T+  V  NA +A  AAS A +AA  G  ++R +   +  L + +  AV VV+ LA+++
Sbjct: 473 TQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNN 532

Query: 540 ENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQ 599
             I  IL+ I GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +  EI+
Sbjct: 533 TGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIR 592

Query: 600 TMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAE 659
           ++I +++ GT+DVV+ ++ S      + +  A A   L  +  A+  IN+M+ QI  AA+
Sbjct: 593 SVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQ 652

Query: 660 EQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712
           +Q  V+  + ++V+NI  ++ ++    + S      + +L+ +Q+ L+ QFKV
Sbjct: 653 DQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705