Pairwise Alignments

Query, 595 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1171 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  120 bits (300), Expect = 4e-31
 Identities = 104/398 (26%), Positives = 184/398 (46%), Gaps = 50/398 (12%)

Query: 237 IMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDEE 296
           I+  + R  QA     L   + +  A++D   D ++ +   G + + N  A+   G+D +
Sbjct: 350 ILGRSARSSQA-----LAKEKAQSAAIIDGSKDAIIGVGTSGVVNNWNRAAELLFGYDAD 404

Query: 297 RL-GQGLGEALVRPELDEQLQLVLRGGSLERAPEDLEVEV---EGELRLLTYSLTPVSHT 352
              G  + +  + PE+D  L  ++   +      +L+ E+   EG +  L  S++P+   
Sbjct: 405 YAKGHFINQLALLPEVD--LAALVSKANQGNKTLNLDAELPLNEGRIVDLYVSVSPILGE 462

Query: 353 QGHILGAVMVLHDVT-EQRAFER------------------------VRSEFVLRASHEL 387
             H LG  +++ DV+ E++A ++                        V+S F+   SHE+
Sbjct: 463 NKHALGVAIIIRDVSIEKQAAKKIQLVNAELEKKVAIRTQELQKASLVKSSFISNISHEM 522

Query: 388 RTPVTGMHMAFGLFRERAKFPAESREADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKL 447
           RTP+ G+     L R   K     R+A  L+     +  L  LIND+L+ S+ + G   L
Sbjct: 523 RTPLNGIVGTLNLVR---KDSLTERQARYLEMAEVSVNTLSALINDVLDLSKIEAGKLDL 579

Query: 448 TLGPCDVTDLLEHARARFVEPANAQNIELLVEAQS-DLPRLYADQAQLERVLDNLLGNAL 506
            +   +  +L+E   +     A  + IE +++        + +D  ++ ++L NL+ NA+
Sbjct: 580 DMSSFNPLNLIESVCSSMAVKAQEKGIEFVIDVVDLRCQSVDSDPHRITQILTNLINNAI 639

Query: 507 RHTAAGGQIRLQA----RRHGE-RVIVSVEDNGEGIAYGQQGRIFEPFVQ----VGRKKG 557
           + T  G  I+++A    R  GE   I  V D G GIA   Q ++F  F Q    +  + G
Sbjct: 640 KFTDHG-YIKVRAHSRLRETGELEFICEVSDTGIGIAEENQAKLFTAFSQATSSIAAQYG 698

Query: 558 GAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALPL 595
           G GLGL++CKE+ +L  G+M   S  GQG+ F   + L
Sbjct: 699 GTGLGLSICKELSELLNGKMSFESHKGQGSCFIFTMVL 736