Pairwise Alignments

Query, 595 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (333), Expect = 9e-35
 Identities = 100/372 (26%), Positives = 182/372 (48%), Gaps = 30/372 (8%)

Query: 251  DELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDEERL-GQGLGEALVRP 309
            +EL   +   +A+ D    G++ +D +G +   N      +G   E L G  + + L   
Sbjct: 897  EELAVSEAHFKALFDGSTIGIVNVDAKGVILDCNDQYCEDMGQTRESLCGVPIFDVLSLQ 956

Query: 310  ELDE---QLQLVLRGGSLERAPEDLEVEVEGELRLLTYSLTPVSHTQGHILGAVMVLHDV 366
            + +    Q + +  G       E   +   GE   +T +++ +  +Q     AV+ + D+
Sbjct: 957  DKETAKAQFRELAEGKVDHYRGERSFIRPNGEPLWMTVNVSALFDSQKQFESAVVSMVDM 1016

Query: 367  TEQR--------------AFERVRSEFVLRASHELRTPVTGMHMAFGLFRERAKFPAESR 412
            TE +              A  + + +F+   SHE+RTP   M+   G+ +   +   + +
Sbjct: 1017 TELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTP---MNAIIGMSQLCLQTALDKK 1073

Query: 413  EADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLGPCDVTDLLEHARARFVEPANAQ 472
            + + ++ +    + L+ +IND+L+FS+ + G   +   P  +  +LE     F E A  +
Sbjct: 1074 QKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSEKAAHK 1133

Query: 473  NIELLVEAQSDLPR-LYADQAQLERVLDNLLGNALRHTAAGG---QIRLQARRHGERVI- 527
             +ELL     ++PR L+ D  +L +VL NL+ NA++ T  G     + L  +++ + V+ 
Sbjct: 1134 QLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQNDDVVLR 1193

Query: 528  VSVEDNGEGIAYGQQGRIFEPFVQVG----RKKGGAGLGLALCKEIVQLHGGRMGVYSRP 583
             SV D+G G+   QQ ++F+ F Q      RK GG GLGLA+CK++V+L GG +GV S+ 
Sbjct: 1194 FSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGVESQF 1253

Query: 584  GQGTQFYMALPL 595
            G G+ FY  + L
Sbjct: 1254 GHGSTFYFTVKL 1265



 Score = 52.4 bits (124), Expect = 2e-10
 Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 13/203 (6%)

Query: 174 LLGLVGLAVLIIGFVTAHGIARRFGGPIEALAKAADKIGQGDF-EVTLPISSAAEMNQLT 232
           +L L  L +L++  +T +  A+R   P+EAL       GQG   ++ +P  + +E+  L+
Sbjct: 311 VLNLSLLTLLLL--LTCYIAAKRLTRPLEALESGILAFGQGKAQQLAIPKGAVSEIVTLS 368

Query: 233 RRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDG--LLMIDRQGRLEHLNPVAQRQ 290
             F  MAE L + +   +D   +   R   ++D + D      +D  G+L  ++    + 
Sbjct: 369 STFNQMAELLGEREQAILD---SRGNRFARLIDGMSDKSFYCSLDPSGQLAQVSEGVTKV 425

Query: 291 LGWDEERLGQGLGEALVRPELDEQ----LQLVLRGGSLERAPEDLEVEVEGELRLLTYSL 346
           LG   E L +          L+E+      L L+G ++     +L ++  G  R+L   +
Sbjct: 426 LGMSPELLKRKYQRLFTANPLNEKNWEYTDLALKGENVPSHQVEL-LDASGHPRMLDLFM 484

Query: 347 TPVSHTQGHILGAVMVLHDVTEQ 369
            P+    G ++   M+  DVTEQ
Sbjct: 485 LPLVSDTGELMSVEMLFTDVTEQ 507