Pairwise Alignments

Query, 684 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 857 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  128 bits (322), Expect = 1e-33
 Identities = 139/439 (31%), Positives = 198/439 (45%), Gaps = 58/439 (13%)

Query: 276 EAPAPESALAAFIETPEIQVETPDETAIGSLSLPPVLEVEEPDPDELQ-ADGTYALPDSP 334
           +APA  +A A  I T     E P   ++       +L V+  DP  L+     +ALPD+ 
Sbjct: 175 DAPAYVAASAITIGTDSSVPEIPGPPSL-------MLFVKVLDPGALENLARDFALPDAH 227

Query: 335 EPSYSSVAKHIEDTLLGLLEELSLPE-RHRPQAEAMRERLAHGLNWYELLPILD------ 387
                  A    DT   LL+ L+L     RPQ      R         LLP+L       
Sbjct: 228 IARTPGPA----DTAQLLLDNLTLEALAWRPQTPGQDLRKI-------LLPLLAVALFVL 276

Query: 388 ---DLAVLM--LAITDSGQHEFEAYL---KQLNERLEAFQGHLQVASDG--HADSRSAAR 437
               LAVL   LA+  + + ++ + L   K L    E F+   +V+SD     DS     
Sbjct: 277 GILALAVLRHALAMLRAQERQYASLLAHRKALERSEERFRDIAEVSSDWLWEVDSTGTLT 336

Query: 438 ELDTQIREQVDGLQSSVQGAADLDSLKHVLESHL---EGLLGTMDEHQQQ--------RD 486
            L  +  EQV G   +      L  L H     +   + LLG  +             R+
Sbjct: 337 YLSERF-EQVTGFSPTQWLGKPLHRLLHPHGGSISIAQWLLGGANSDSSAPLLCEYTARN 395

Query: 487 QREQETAARLKGLAERVANMEQEAQGYREHLEVQRQ---KALIDPLTGLPNRAAWSERLD 543
           QR +     ++ +          A    + L    Q    +L DPLTGL NR    + L 
Sbjct: 396 QRIRTCKLSVRAIEAGTLGFRGTATDITDELRALAQIKHLSLHDPLTGLANRNRLFDCLR 455

Query: 544 QEVNTWHQRGDSLSLAMLDLDHFKRINDGYGHLAGDKVLKIIANVLRKRLRSTDFIARFG 603
           + ++   +R   L+L  LD+D FK +ND  GH  GDKVLK +A++L++ +R TD +AR G
Sbjct: 456 EHLDRADRR--PLALLNLDMDRFKPVNDSLGHAVGDKVLKEVAHILQQNVRGTDLVARLG 513

Query: 604 GEEFVLLMPDSSLTDALAAGEVLRAAIEAC--PFHFKGEPVTITVSMGVAQFQPG-ERSD 660
           G+EFV++MPD    D L   ++    I+    P H  G  + + VS+GVA  QPG ER+D
Sbjct: 514 GDEFVIVMPDPGDADDL--DQLCERLIDCMQRPMHLDGNTLYLGVSIGVAWSQPGDERAD 571

Query: 661 LALKRADEALYRAKAAGRN 679
             L+ AD ALY AKAAGRN
Sbjct: 572 ELLRHADIALYAAKAAGRN 590