Pairwise Alignments

Query, 241 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

 Score =  264 bits (674), Expect = 1e-75
 Identities = 134/238 (56%), Positives = 175/238 (73%), Gaps = 1/238 (0%)

Query: 4   LKAQHLAKAYKSRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGRVLID 63
           L+ + L K+Y  + V+RDVS+S+D G++V LLGPNG+GKTT FY I GLV  + G V ID
Sbjct: 15  LRIEKLRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVTID 74

Query: 64  DLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKELDRDGRRKELESLLQ 123
             + +  PM+ RAR GIGYLPQE SIFR LSV DNI ++L+   +     RR+ LE LL 
Sbjct: 75  GQNATTLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVK-HAHKRRERLEELLS 133

Query: 124 EFHINHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHHL 183
           +F I H+R    ++LSGGERRRVEIAR LA  PK++LLDEPFAGVDPISVGDI+ ++  L
Sbjct: 134 DFSIEHLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGDL 193

Query: 184 KAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDSATILANDLVKEVYLGHEFRL 241
           K +GIGVLITDHNVRETL+I + AYI++DG+++  G  A ++ N+ V+ VYLG  FR+
Sbjct: 194 KKRGIGVLITDHNVRETLEIVDRAYILHDGKVLMSGTPAEVVDNENVRRVYLGDNFRI 251