Pairwise Alignments

Query, 285 a.a., glmZ(sRNA)-inactivating NTPase from Pseudomonas simiae WCS417

Subject, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (667), Expect = 1e-74
 Identities = 136/286 (47%), Positives = 191/286 (66%), Gaps = 7/286 (2%)

Query: 1   MRLIIVSGRSGSGKSTALNVLEDSGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID 60
           MRLI+VSG+SG+GKS AL VLED G+YC+DNLP  LL    +      + +Q  VAVSID
Sbjct: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSV----QGSQQNVAVSID 56

Query: 61  ARNLPSHLERFPQLLEEVRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSPHR--SLA 118
            RNLP        +L++++  +    +L+LDA +ETLLKR+SETRR HPLS      SLA
Sbjct: 57  IRNLPKEPSLVQDVLDQLKQNN-DVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLA 115

Query: 119 EAIEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGM 178
           +AIE E +LLGP+ + ADL +++++ +L++L + +++R+  +       + +SFGFK G+
Sbjct: 116 QAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGL 175

Query: 179 PVDADLVFDVRCLPNPYWKPELREQSGLDQAVADYLAAQPDVEEMFQDISSYLLKWLPRF 238
           P DAD VFDVR LPNP+W+P+LR  +GLD  +  +L    +V E+ Q I  +   WLP  
Sbjct: 176 PTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPML 235

Query: 239 AASNRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDL 284
             +NR+Y+TIAIGCTGG HRSVYLT++LG+   Q    VQ+RH  L
Sbjct: 236 EKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281