Pairwise Alignments

Query, 285 a.a., glmZ(sRNA)-inactivating NTPase from Pseudomonas simiae WCS417

Subject, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

 Score =  212 bits (539), Expect = 1e-59
 Identities = 120/284 (42%), Positives = 170/284 (59%), Gaps = 6/284 (2%)

Query: 2   RLIIVSGRSGSGKSTALNVLEDSGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSIDA 61
           R+I+V+G SG+G++T L  LED G+  +DNLP  L   L +      +  +PLV + ID 
Sbjct: 55  RVIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLFEALTQG---RWDQPRPLV-LGIDT 110

Query: 62  RNLPSHLERFPQLLEE-VRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSPHRSLAEA 120
           R    H       +E  V A      +L++D D+E L++R++ETRRRHPL+   R LA+ 
Sbjct: 111 RTRGFHAATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRRRHPLAVD-RPLADG 169

Query: 121 IEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGMPV 180
           I  E  L+ P+ + A   ++T+ L   +LR  I+        P  A  V SFGF+ G+P 
Sbjct: 170 IALERALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAIFVSSFGFRNGLPR 229

Query: 181 DADLVFDVRCLPNPYWKPELREQSGLDQAVADYLAAQPDVEEMFQDISSYLLKWLPRFAA 240
           +ADLVFDVR L NP+++P LRE +GLD AVA Y+AA PD   +   +++ L   +PR+  
Sbjct: 230 EADLVFDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRVTALLALLVPRYEK 289

Query: 241 SNRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDL 284
             ++Y+TIAIGCTGG HRSVY  ERL   L +T +   VRHRDL
Sbjct: 290 EGKSYLTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRDL 333