Pairwise Alignments

Query, 481 a.a., glutamyl-tRNA amidotransferase from Pseudomonas simiae WCS417

Subject, 631 a.a., Glu-tRNA(Gln) amidotransferase subunit GatE from Methanococcus maripaludis S2

 Score = 72.4 bits (176), Expect = 4e-17
 Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 10/150 (6%)

Query: 117 VGVTRAHLEEDAGKSLHEEFPGATGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKTIHAL 176
           +GVT   LEEDA K + E+    T   ++R G PLLEI +EPD+ S K      + I  +
Sbjct: 151 IGVTSLCLEEDACKKI-EDGKDYTKYCVDRLGIPLLEITTEPDITSPKMGKEAARRIGTI 209

Query: 177 VRYLGICDGNMAEGSLRCDCNVSIRPKGQVEFGTRCEIKNVNSFRFIEKAINSEVRRQIE 236
           +R  G     +  G++R D N+SI+       G R E+K V +   IEK I +EV RQI 
Sbjct: 210 LRATGKVKRGL--GTIRQDVNISIKN------GARIEVKGVQNLDLIEKIIENEVTRQIS 261

Query: 237 LIEDGGKVIQQ-TRLYDPNKDETRAMRSKE 265
           L E   +++++   + D  KD T  ++  E
Sbjct: 262 LNEIKEELLKRNAEVVDEIKDITELLKDTE 291



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 59/263 (22%), Positives = 124/263 (47%), Gaps = 25/263 (9%)

Query: 223 IEKAINSEVRRQIELIEDGGKVIQQTR--LYDPNKDETRAMRSKEEANDYRYFPDPDLLP 280
           +E+A+N+ + R  E +     + ++TR  L D N    R +         R +P+ D+  
Sbjct: 385 VERALNAVIERAKESMIG---IPEETRKALDDGNTSYLRPLPGAA-----RMYPETDVPT 436

Query: 281 VVLEDSFLNDIRATLPELPQQKRERFQAQFGLSVYDASVLASSREQANYFEKVVSIAGDA 340
           + + +  L  +R  LPE+P++K  RF  ++ L+   A  +  S    + FE +       
Sbjct: 437 ITITEEKLEFVRNNLPEMPEEKLVRFVKEYELNEDLAKQMVMS-YHVDLFETLSKKYSKI 495

Query: 341 K--LAANWVMVELGSLLNKQGLEIDEAPVSAEQLGGMLLRIKDNTISGKIAKTVFEA-MA 397
           K  L A  +   +   + ++GL+ D   ++ E L  +   + ++ +S +    V +  + 
Sbjct: 496 KPTLIATTLEATIKE-IKREGLDTD--LLTEEHLEELFNGLSEDKMSKEAVPDVIKGFIE 552

Query: 398 SGEGSADEIIEKRGLKQVTDSGAISAVLDEMLAANAEQVEQYRAADEAKRGKMFGFFVGQ 457
           +     DEI+E +G+  ++    + +++++++  N  QV      +E   G M G  +G+
Sbjct: 553 NPTKKLDEILEIKGMSSMSVE-EVESIIEDIINQNISQV------NEKGMGAM-GLLMGR 604

Query: 458 AMKASKGKANPQQVNELLKSKLE 480
            M   +GKA+ + +N  L+ KL+
Sbjct: 605 CMAQLRGKADGKLINTTLQKKLK 627