Pairwise Alignments

Query, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 353 a.a., conjugal transfer protein TraR from Pseudomonas fluorescens FW300-N2C3

 Score =  500 bits (1288), Expect = e-146
 Identities = 267/346 (77%), Positives = 302/346 (87%), Gaps = 1/346 (0%)

Query: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60
           +   L+LLI GAE+LVRAAV LAA L+VRPLIIGLT+VAFGSSAPQM VSLQATLA N D
Sbjct: 4   LFGALLLLIGGAELLVRAAVGLAARLQVRPLIIGLTVVAFGSSAPQMAVSLQATLAQNAD 63

Query: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120
           IAVGSVIGS IFNILVTLGLSALIIPLRVSRQLVRLDIP+MI A LLVF LA NE LT L
Sbjct: 64  IAVGSVIGSGIFNILVTLGLSALIIPLRVSRQLVRLDIPLMIGASLLVFVLAWNEELTRL 123

Query: 121 DGLVLLVALVAYLGVLHYQTRHSRRPRTLD-TVARAPWLSSVLLMLGGLLILVLAGHLLL 179
           DG+ LL+AL  YLG+L  Q+RHS RP  +   VA+  W+ SVL++  GL +LV AGHLLL
Sbjct: 124 DGVWLLLALAVYLGLLLRQSRHSGRPHPVGGNVAQLSWVKSVLMIASGLAMLVFAGHLLL 183

Query: 180 GAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGSNLFNLLG 239
           GAAV+VA DLGLSER+IGLT++ V TSLP LATSLIAALRG+R+IAVGNVIGSNLFNLLG
Sbjct: 184 GAAVEVATDLGLSERIIGLTIVAVSTSLPELATSLIAALRGQRDIAVGNVIGSNLFNLLG 243

Query: 240 VLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVFYTGYRVTRAEGLVLLGLYLAYG 299
           VLG+TAL AP+PLSVSPNALDFDLPVMLGV VLCLPVFY+GYRVTRAEGL+ LGLYLAYG
Sbjct: 244 VLGVTALAAPTPLSVSPNALDFDLPVMLGVAVLCLPVFYSGYRVTRAEGLLFLGLYLAYG 303

Query: 300 LHVMAFTTGMPLASKLEQLMLYYVLPVLVAFLLFSTLRAWRRQHKR 345
           LHV++FTTGMPLA +LE+LML+YVLP L+AFLLF++LRAWRRQH +
Sbjct: 304 LHVVSFTTGMPLAGQLERLMLFYVLPALLAFLLFTSLRAWRRQHHK 349