Pairwise Alignments

Query, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 332 a.a., calcium/sodium antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (507), Expect = 6e-56
 Identities = 125/309 (40%), Positives = 188/309 (60%), Gaps = 22/309 (7%)

Query: 4   GLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTDIAV 63
           GL +L+ GA+ LV  +  LA ++ + PL+IG+TI+A GSSAP+M VS  A L G TD AV
Sbjct: 24  GLAILVWGADKLVFGSAALARNIGISPLVIGMTILAMGSSAPEMMVSATAALEGKTDTAV 83

Query: 64  GSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPLDGL 123
           G+V+GS+I NI + LG++A++ PL V   ++R ++P+MI   L+   +  +  L   +G+
Sbjct: 84  GNVLGSNIANIALILGITAIVKPLSVGSAVLRRELPMMIGVTLIAGAILWDNHLGFYEGI 143

Query: 124 VLLVALVAYLGVLHYQTRHSRR-------------PRTLDTVARAPWLSSVLLMLGGLLI 170
           +L+    A++ V+   +R  ++             P  +     A W      ++ GL++
Sbjct: 144 LLIALFAAFILVMLQVSRKEKQNGDALLDEQESEIPVGVSNPKAAFW------VVVGLIL 197

Query: 171 LVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVI 230
           L +   +L+  AV +A   G+S+ VIGLT+I VGTSLP LA SL  AL+GE ++AVGN+I
Sbjct: 198 LPIGAGMLVDNAVVIAKYFGMSDLVIGLTIIAVGTSLPELAASLAGALKGEDDMAVGNII 257

Query: 231 GSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVFYTGYR-VTRAEGL 289
           GSN+FN+L V+GL  LL PS L  SP A+  D  VMLGV +L + V     R +TR EG 
Sbjct: 258 GSNVFNILAVMGLPGLLNPSLL--SPEAMSRDFWVMLGVSLLLVGVALGKKRQITRLEGA 315

Query: 290 VLLGLYLAY 298
           +LL  ++ Y
Sbjct: 316 LLLCSFIGY 324



 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 56/138 (40%), Positives = 84/138 (60%), Gaps = 2/138 (1%)

Query: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60
           +V GL+LL IGA +LV  AV +A    +  L+IGLTI+A G+S P++  SL   L G  D
Sbjct: 191 VVVGLILLPIGAGMLVDNAVVIAKYFGMSDLVIGLTIIAVGTSLPELAASLAGALKGEDD 250

Query: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLV--FTLAANEALT 118
           +AVG++IGS++FNIL  +GL  L+ P  +S + +  D  VM+   LL+    L     +T
Sbjct: 251 MAVGNIIGSNVFNILAVMGLPGLLNPSLLSPEAMSRDFWVMLGVSLLLVGVALGKKRQIT 310

Query: 119 PLDGLVLLVALVAYLGVL 136
            L+G +LL + + Y+  L
Sbjct: 311 RLEGALLLCSFIGYITYL 328



 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 50/141 (35%), Positives = 89/141 (63%), Gaps = 3/141 (2%)

Query: 158 LSSVLLMLGGLLILVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAA 217
           + +V+ +  GL ILV     L+  +  +A ++G+S  VIG+T++ +G+S P +  S  AA
Sbjct: 15  IEAVVFLFIGLAILVWGADKLVFGSAALARNIGISPLVIGMTILAMGSSAPEMMVSATAA 74

Query: 218 LRGEREIAVGNVIGSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVF 277
           L G+ + AVGNV+GSN+ N+  +LG+TA++   PLSV    L  +LP+M+GV ++   + 
Sbjct: 75  LEGKTDTAVGNVLGSNIANIALILGITAIV--KPLSVGSAVLRRELPMMIGVTLIAGAIL 132

Query: 278 YTGYRVTRAEGLVLLGLYLAY 298
           +  + +   EG++L+ L+ A+
Sbjct: 133 WDNH-LGFYEGILLIALFAAF 152