Pairwise Alignments

Query, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 316 a.a., CaCA family Na(+)/Ca(+) antiporter (RefSeq) from Shewanella sp. ANA-3

 Score =  246 bits (629), Expect = 4e-70
 Identities = 139/306 (45%), Positives = 211/306 (68%), Gaps = 8/306 (2%)

Query: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60
           ++ G ++L +GAE LVR A  +A  L + PLIIGLTIVAFG+SAP++ VS+++ LAGN+ 
Sbjct: 7   IIGGFIILTLGAEALVRGASSIALRLGITPLIIGLTIVAFGTSAPELAVSVKSALAGNSG 66

Query: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120
           IA+G+VIGS+I NI + L ++ALI P++V  Q+VR DIP+MILA +L + L  +  L+ +
Sbjct: 67  IALGNVIGSNIANIGLILAITALIRPIQVQSQMVRRDIPLMILASMLFWGLLFDGELSLI 126

Query: 121 DGLVLLVALVAYLGVLHYQTRHSRRP--RTLDTVARAPWLSSVLLMLGGLLILVLAGHLL 178
           DG++LL  LV YL   ++ ++++       ++   + P L SV  ++ G+ +LV  G L 
Sbjct: 127 DGVILLSLLVGYLVFSYFSSKNTTDADGEIIEEGPKNP-LLSVAFIVVGIGMLVGGGILF 185

Query: 179 LGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGSNLFNLL 238
           +  AVD+A   G+SE +IGLT++ +GTS+P L TS++AAL+GE +IA+GNV+GSNLFN+L
Sbjct: 186 VNGAVDLAKVFGVSEVIIGLTIVAIGTSMPELVTSVLAALKGESDIAIGNVVGSNLFNIL 245

Query: 239 GVLGLTALLAP-SPLSVSPNALDFDLPVMLGVVVLCLPVFYTGYRVTRAEGLVLLGLYLA 297
           G+LG+TA++ P S L        FD  VML + V+ LP  ++G R+ R EG  LL  YL 
Sbjct: 246 GILGVTAIVHPVSALGFQ----SFDFIVMLALAVVILPFAWSGLRIGRREGATLLVAYLG 301

Query: 298 YGLHVM 303
           Y ++++
Sbjct: 302 YMIYLV 307



 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 3/137 (2%)

Query: 162 LLMLGGLLILVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGE 221
           L ++GG +IL L    L+  A  +A  LG++  +IGLT++  GTS P LA S+ +AL G 
Sbjct: 5   LSIIGGFIILTLGAEALVRGASSIALRLGITPLIIGLTIVAFGTSAPELAVSVKSALAGN 64

Query: 222 REIAVGNVIGSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVFYTGY 281
             IA+GNVIGSN+ N+  +L +TAL+   P+ V    +  D+P+M+   +L   + + G 
Sbjct: 65  SGIALGNVIGSNIANIGLILAITALI--RPIQVQSQMVRRDIPLMILASMLFWGLLFDG- 121

Query: 282 RVTRAEGLVLLGLYLAY 298
            ++  +G++LL L + Y
Sbjct: 122 ELSLIDGVILLSLLVGY 138