Pairwise Alignments

Query, 517 a.a., Galactarate dehydratase (EC 4.2.1.42) (from data) from Pseudomonas simiae WCS417

Subject, 501 a.a., D-arabinoate dehydratase (EC 4.2.1.5); also involved in L-fucose catabolism (from data) from Sinorhizobium meliloti 1021

 Score =  300 bits (769), Expect = 6e-86
 Identities = 185/489 (37%), Positives = 258/489 (52%), Gaps = 14/489 (2%)

Query: 9   SPRSIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVDFIPQSHKVTLEDIPEGGQIIRYGQ 68
           +P SI L   DNVV+      +  G     G+  V  I   HK  +  I  G  +++YGQ
Sbjct: 3   APSSILLSPDDNVVVAT--AAIAPGDRLAGGVSAVARIEPGHKAAIRRIDVGEPVVKYGQ 60

Query: 69  TIGYALAPIPRGSWVQEDQLRMPTAPPLDSLPLSTEVPEAQAPL--EGFTFEGYRNADGT 126
            IG A +PI  G  V    L          L +   VP   A    +  TF GYR ADG 
Sbjct: 61  AIGRATSPIAPGEHVHSHNLAFDQG----RLAVGAAVPPEAASEADKARTFLGYRRADGR 116

Query: 127 VGTRNILGITTTVQCVTGVLDHAVKRIKDELLPKYPHVDDVVALTHSYGCGVAITATDAY 186
             TRN +GI  +V C T V           +LPKY  +D  V + H  GCG++ T     
Sbjct: 117 AATRNYIGIVASVNCSTTVCRAIADEANRRILPKYEGIDGFVPIVHDQGCGMSSTGDGMK 176

Query: 187 IPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHDNDSSVDLSEPWLYRLQDSSHGFT 246
              RT+   AR+ N GG  L++ LGCE     Q+     S    +E   + +Q++  G  
Sbjct: 177 NLHRTLAGYARHANFGG-VLMVGLGCE---VNQLTLYGQSGAG-AEKRHFNIQEAG-GSR 230

Query: 247 EMIEQIMALAETRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGYASDLLLR 306
             +E+ + + +   K++   RR  +P SE+I+G+QCGGSD  SGITANPALG A D+L  
Sbjct: 231 RSVERALGILDEIAKEVAAARRVPIPVSEIIVGLQCGGSDGLSGITANPALGAAVDILAA 290

Query: 307 AGATVMFSEVTEVRDAIYLLTSRAENTQVAQELVREMDWYDRYLAKGEADRSANTTPGNK 366
           AG T + SE +E+  A +LL SRA N  VA +L   + W++ Y+A   A    N +PGNK
Sbjct: 291 AGGTAILSETSEIYGAEHLLRSRAVNETVAVKLDGLIAWWEDYVAMHGASLDNNPSPGNK 350

Query: 367 KGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKGKGLIFCATPASDFVCGTLQLAAGMN 426
           +GGL+ I+EKSLG++ K G S +  V    ER    GL+F  TP  D V  T Q+A G N
Sbjct: 351 RGGLTTILEKSLGAVAKGGRSPLTAVYNYAERVTEPGLVFMDTPGYDPVSATGQVAGGAN 410

Query: 427 LHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRATIEELGWELFHF 486
           +  FTTGRG+ +G   AP +K+++ T L +   + +DID G IA+G  TI +LG  +F  
Sbjct: 411 VIAFTTGRGSCFGCRPAPSIKLTSNTALYRAMEEDMDIDCGVIASGETTIADLGRGIFEL 470

Query: 487 YLDVASGRK 495
            ++ ASGRK
Sbjct: 471 IIETASGRK 479