Pairwise Alignments

Query, 364 a.a., ATPase from Pseudomonas simiae WCS417

Subject, 388 a.a., AFG1 family ATPase (RefSeq) from Shewanella loihica PV-4

 Score =  291 bits (744), Expect = 3e-83
 Identities = 168/388 (43%), Positives = 228/388 (58%), Gaps = 41/388 (10%)

Query: 2   TPLERYQADLKRPEFFHDAAQETAVRHLQRLYDDLVAASQS--KPGMLSKLFGKKDHTPV 59
           +PL+ +Q  L +  F  D AQ+ A+  L+ LY  L A      KPG L       +  P+
Sbjct: 4   SPLQGFQHQLTQENFVDDPAQQQAILRLEALYQALQATPSDAHKPGTLHP----SNQAPI 59

Query: 60  KGLYFWGGVGRGKTYLVDTFFEALPFKEKVRTHFHRFMKRVHEEMKTLPGEKNPLTIIAK 119
           KGLY WG VGRGKT L+D F ++LP    +R HFHRFM+RVH+E+K   G+++PL  IA 
Sbjct: 60  KGLYLWGDVGRGKTMLMDLFCQSLPDGMALRLHFHRFMERVHKELKAESGKRDPLRRIAG 119

Query: 120 RFSEEARVICFDEFFVSDITDAMILGTLMEELFKNGVTLVATSNIVPDGLYKDGLQRARF 179
           R ++  RVICFDEFFVSDI DAMIL  L E LF +G+TLVATSN   + LY++GL R RF
Sbjct: 120 RLAQNYRVICFDEFFVSDIGDAMILSGLFEALFDHGITLVATSNTPIERLYENGLARDRF 179

Query: 180 LPAIALIKQNTEIVNVDSGVDYRLRHLEQAELFHFPLNEAAHESLKKSFRALTPECTQAV 239
           LP IAL++ +T+ +++D G+D+RLRHL++ + + F  +E       + F A+ P      
Sbjct: 180 LPCIALLEAHTDALHLDGGMDHRLRHLDKVQTY-FQQDEG---EFSRRFDAMEP---GGG 232

Query: 240 ENDKLMIENREIIALRTCDDVAWFEFRQLCDGPRSQNDYIELGKIFHAVILSGVEQMSVT 299
            +  L I  REI  +R      W +F  LC GPRSQ DYI +   F  ++LS V  +  T
Sbjct: 233 SDTPLTILGREISVIRRGTSTLWLDFDALCGGPRSQLDYIAIASQFDTLLLSQVPPLGGT 292

Query: 300 ----------------------------TDDIARRFINMVDEFYDRNVKLIISAEVELKD 331
                                        DD ARRFI +VDE YD+ VKL + A + L+ 
Sbjct: 293 PRSWIRARGTEDGAAAVAAGDRQLNYAPNDDPARRFIALVDELYDQGVKLYLEASLPLEQ 352

Query: 332 LYTGGRLNFEFQRTLSRLLEMQSHEFLS 359
           LYT G L FEF+RT+SRL+EMQS ++L+
Sbjct: 353 LYTPGALAFEFRRTMSRLIEMQSRQYLN 380