Pairwise Alignments

Query, 213 a.a., GTP-binding protein from Pseudomonas simiae WCS417

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 11/162 (6%)

Query: 29  DEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDDRR---LVDLPG 85
           D   ++A  GR N GKS+  N +           PG T+   +  +  D R   L+D  G
Sbjct: 203 DLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAG 262

Query: 86  YGYAK--VPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVASGMP 143
               K       K    + L+A     E    ++L++D R  ++D DL +L +A+ SG  
Sbjct: 263 VRRRKRINETVEKFSVVKTLQAI----EDANVVLLVVDARENISDQDLSLLGFALNSGRS 318

Query: 144 MHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSA 185
           + I + K D L++   ++  +K + + R G+ D   I   SA
Sbjct: 319 IVIAVNKWDGLSFDVKEH--VKKELDRRLGFVDFARIHFISA 358



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 34 VAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQ 67
          VA  GR N GKS+  N LT    A  +  PG T+
Sbjct: 5  VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTR 38