Pairwise Alignments

Query, 213 a.a., GTP-binding protein from Pseudomonas simiae WCS417

Subject, 490 a.a., Small GTP-binding protein protein domain:GTP-binding protein from Pseudomonas syringae pv. syringae B728a

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 20  AAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQ---LLNFFKLDD 76
           A ++    + +G ++A  GR N GKS+ +N +           PG T+    + F + ++
Sbjct: 184 AKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERNEE 243

Query: 77  DRRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKG---LILMMDIRHPMTDFDLLM 133
              L+D  G     V    K+H +    + +   +++K    +I +MD R  + D DL +
Sbjct: 244 KYTLIDTAG-----VRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 134 LDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSAPKRMGLEE 193
           L +A+ +G  + I L K D +T G  +   +K++ E R  + D   I   SA    G+  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPG--ERDFVKIELERRLFFVDFADIHFISAMHGTGVGN 356

Query: 194 AY 195
            Y
Sbjct: 357 LY 358



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 34 VAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQ 67
          +A  GR N GKS+  N LT    A      G T+
Sbjct: 5  IALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTR 38