Pairwise Alignments

Query, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 547 a.a., peptide ABC transporter substrate-binding protein SapA from Klebsiella michiganensis M5al

 Score =  374 bits (959), Expect = e-108
 Identities = 199/541 (36%), Positives = 304/541 (56%), Gaps = 12/541 (2%)

Query: 3   RIALKPLLLAAGLLACMPLAQAA---------STLVYCSEASPAGFDPSQYTSGTDFDAS 53
           R+ L  LL A  +L     A  A         S  VYC       F+P + +SG   D  
Sbjct: 2   RLKLSSLLAAVSMLCGQAFAAPALPAHADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDTL 61

Query: 54  AETVFNRLTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNAD 113
           A  +++RL         + P LA SW++  +G TY FHLR+ V F TT +F PTR+FNAD
Sbjct: 62  AAQLYDRLLDVDPYTYRLVPELAESWEVLDNGATYRFHLRNNVPFQTTAWFKPTRNFNAD 121

Query: 114 DVLFTFNRLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQ 173
           DV+FTF R+ +   P+     S  PYF  +    +++SV KLD H+V F L   DASF+ 
Sbjct: 122 DVIFTFGRIFNRDHPWHNVNGSSFPYFDSLQFADSVESVRKLDSHSVEFRLKRPDASFLW 181

Query: 174 NLAMSFASVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPE 233
           +LA  +ASV SAEYAA+L +  + E I+++PVGTGPF    Y+    IR   +  YW+ +
Sbjct: 182 HLATHYASVMSAEYAAKLAQSDRQEMIDRQPVGTGPFQLAEYRSGQYIRLQRHPAYWRGK 241

Query: 234 DVKLDNLVFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFL 293
            + +  +V  +      RL KL  GEC V  +P  + + +++ DP L +  + G N+ +L
Sbjct: 242 PL-MPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNIAWL 300

Query: 294 AYNVTHPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYD 353
           A+N   PPLD  +VR AL +AI+   +++++Y    + A + LP A W+YD   +   Y+
Sbjct: 301 AFNTAKPPLDNPEVRHALALAINNQRLMQSIYYGTAETAASMLPRASWAYDNEARITEYN 360

Query: 354 PTKAKALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWG 413
           PT+A+A LK  G+    T+ LW  T  +A NP+   +A++IQ D  ++G+K  I+  E  
Sbjct: 361 PTEARARLKALGLEK-LTLKLWVPTSSQAWNPSPLKTAELIQADMAQIGVKVIIMPVEGR 419

Query: 414 EYIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKG-SNYAKWCNPAYDKLVQQAK 472
               R  +  HD  + GW  D+ DPD++   L SCAA+   +NYA WC+  +D+++Q+A 
Sbjct: 420 FQEARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCAAIASQTNYAHWCHREFDEVLQKAL 479

Query: 473 VSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSLD 532
            S     RI+ Y++AQ+IL +++P+ P+A+S   Q  R ++K   +SPFG   F GVS +
Sbjct: 480 TSQQLASRIEAYKEAQRILADELPVLPLASSLRLQAYRYDMKGLVLSPFGNASFAGVSRE 539

Query: 533 K 533
           K
Sbjct: 540 K 540