Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  338 bits (866), Expect = 4e-97
 Identities = 181/503 (35%), Positives = 280/503 (55%), Gaps = 5/503 (0%)

Query: 31  VFCSEGSPAGFDTAQYTTATDNDAAEP-LYNRLVEFEKGETGVVPALATKWDISPDGMTY 89
           V+C E +P  F+         +DA  P +YN L+  +      V +LA+ W ++  G+ Y
Sbjct: 35  VYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVNSTGLEY 94

Query: 90  TFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAYPTEFPYFNGMSLNKN 149
            F LR  V F +   F PTR  NADDV+F+F R++DP +P+ K   T++P+F G+     
Sbjct: 95  VFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNL 154

Query: 150 IAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLKAGKPSDINQKPIGTG 209
           +  V   D  TV   L+  D +F+ NIA S A ILS EYA QL+   +   ++  P+GTG
Sbjct: 155 LVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDNLPLGTG 214

Query: 210 PFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDASVRVQKLKAGECQVTLHPRP 269
           PF    Y     IR   + QYW+ +  K++Q++F I+   +  + KL   EC V   P  
Sbjct: 215 PFYLAEYHPRDLIRLKRHPQYWEGA-AKVEQVVFDISQRGTGMLAKLLRNECDVLNAPIS 273

Query: 270 ADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFDQLEVRQALDMAVNKQSILNAVYQGA 329
           + + A++ +P++ L T P  N+ +IA N +H   +   VR+AL+ A+N+Q+IL++VY G 
Sbjct: 274 SQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDSVYYGT 333

Query: 330 GQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELLKAAGVKEGTEITLWAMPVQ-RPYNPNA 388
           G +A   +PPT W+Y        Y+   A+ LL+ AG   G E+T+ ++PV+ + YNP+ 
Sbjct: 334 GSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTM-SVPVEPKAYNPSP 392

Query: 389 KLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYS 448
           +  AE++Q++ A IG+ ++++S +  E  + +     D+ L GWTGD GDPDN+L  L S
Sbjct: 393 RKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLRPLLS 452

Query: 449 CDA-IGGNNYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQAQQLLKQQVPITPVAHSTVN 507
           CD+   G N SMWCD  +D L+  A        R  LY QAQ +L Q+ P+ P+AH    
Sbjct: 453 CDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAHGIQF 512

Query: 508 QPLSAKVEGFKVSPFGRNVFSGV 530
              S  + G ++SPF    F+ V
Sbjct: 513 TAYSKSLTGIRISPFNVQPFNTV 535