Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  184 bits (466), Expect = 9e-51
 Identities = 135/462 (29%), Positives = 221/462 (47%), Gaps = 38/462 (8%)

Query: 58  LYNRLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVL 117
           L++ L+++  G T + P LA  ++IS DG  +TF LR+GVKFH+       R+  A DV 
Sbjct: 58  LFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNG------RELTAQDVK 111

Query: 118 FTFNRMLDP--DHPFRKAYPTEFPYFNGMSLNK--NIAKVEKTDPHTVVMTLNTVDAAFI 173
           ++  R+++P    P    + T        S  K   ++ +   DPHT+   L   DA F+
Sbjct: 112 YSIERVVNPATQSPGAGFFAT-IKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFL 170

Query: 174 QNIAMSFAAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDP 233
             +A++FA ++  E  E+       +D  + P+G+G F    +    ++ +     YW+ 
Sbjct: 171 HVMALNFAHVVPKEEVEK-----HGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNE 225

Query: 234 SRVKLDQLIFAINTDASVRVQKLKAGECQVTLHP-RPADVDALKADPNLKLLTKPGFNL- 291
              KLD++ F +  +  V + +L+ GE  V      PA    +  DPN K L   G  L 
Sbjct: 226 GLPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGGQLH 285

Query: 292 -GYIAYNVRHKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKD 350
            GY+  NV+  PFD++EVR+A++MA+NK  IL  +  G    A   +PP+   Y      
Sbjct: 286 TGYVTMNVKMAPFDKVEVRKAVNMAINKDRILR-IINGRAVAANQPLPPSMPGYAKDYAG 344

Query: 351 AAYNPEKAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVS 410
            AY+PE AK+LL+ AG+ +G    L+ M      +P  ++ A+ +Q D   IG+   I S
Sbjct: 345 YAYDPEGAKKLLEQAGLGDGFSTELYVMNT----DPQPRI-AQAIQQDLKAIGITASIKS 399

Query: 411 YEWGEYIKRTKNGEHDVSLIGWTG------DNGDPDNWLGTLYSCDAI--GGNNYSMWCD 462
                 I     GE + + + W+G      D  DP N+ G +  C     GG N+S +C+
Sbjct: 400 LAQANVI--AAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGCGGAVPGGWNWSWYCN 457

Query: 463 PAYDKLIKQAKVVTD---REQRTVLYKQAQQLLKQQVPITPV 501
              DK   +A  + D     +R  L++     + +  P  P+
Sbjct: 458 EELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPI 499