Pairwise Alignments

Query, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  330 bits (845), Expect = 1e-94
 Identities = 179/510 (35%), Positives = 280/510 (54%), Gaps = 2/510 (0%)

Query: 21  VSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRLVDFKPGTTEVVPALAKDLPEI 80
           + +   V C E++P  F+P L    +T+DA    ++N L+   P T   V +LA     +
Sbjct: 29  IRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWT-V 87

Query: 81  SADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQRQLDPNHPWHKKSLVGYPYFE 140
           ++ GL Y F LR D+ F TT +F PTR +NADDV++SF+R +DP +P+HK     YP+F+
Sbjct: 88  NSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFK 147

Query: 141 SMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSSIHSKEYADQLLKSGKTEDLN 200
            + F+ LL  V   DD TV F L+RP+  FL+++  + + I S EYA+QL+   + E L+
Sbjct: 148 GIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLD 207

Query: 201 AKPIGTGPFVFTRYQKDAQARFKANPDYFRGKPAVDPLILAISTDNNVRLQKLKANECQI 260
             P+GTGPF    Y      R K +P Y+ G   V+ ++  IS      L KL  NEC +
Sbjct: 208 NLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDV 267

Query: 261 ALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYMSDARVRHAINIAFDKAGYTE 320
              P    +P+I+K+P++ +    AM  ++ A+NT H  ++D RVR A+N A ++    +
Sbjct: 268 LNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILD 327

Query: 321 ALFGKGNAVVGTGPYPPTLLGFNEKLKNPPRDLDKARALLKEAGVPEGTEFTLFTRNGGG 380
           +++  G   +     PPT   + +       D + A+ALL+EAG   G E T+       
Sbjct: 328 SVY-YGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPK 386

Query: 381 PTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEMLKRAKNGEHDMVSAGWVGDNGDPDNF 440
             NP+P   A+ +QA+LA IG+ + +   +  E  + +     D+  +GW GD GDPDNF
Sbjct: 387 AYNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNF 446

Query: 441 LTPNLSCDAAKNGENYARWCNKEFQDLIDKARAIAEPAQRAALYEQAQDVFDKDQPWLPM 500
           L P LSCD+ + G N + WC+ +F  L+D A    +P  R  LY QAQ++ +++ P +P+
Sbjct: 447 LRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPL 506

Query: 501 AYPKLFTAMRKNVEGFTQSPLGTNNFATTQ 530
           A+   FTA  K++ G   SP     F T +
Sbjct: 507 AHGIQFTAYSKSLTGIRISPFNVQPFNTVE 536