Pairwise Alignments

Query, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  182 bits (461), Expect = 4e-50
 Identities = 147/489 (30%), Positives = 232/489 (47%), Gaps = 56/489 (11%)

Query: 53  ETMFNRLVDFKPGTTEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNAD 112
           +++F+ L+D+ PGTTE+ P LA+   EIS DG  +TF LR  +KFH        R + A 
Sbjct: 56  KSLFDGLMDYVPGTTELRPDLAESY-EISEDGKIFTFKLRKGVKFHNG------RELTAQ 108

Query: 113 DVLWSFQRQLDPNHPWHKKSLVGYPYFESM-GFKEL-------LKSVEKTDDHTVVFTLT 164
           DV +S +R ++P          G  +F ++ G +E        L  +   D HT+ F LT
Sbjct: 109 DVKYSIERVVNP-----ATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELT 163

Query: 165 RPEAPFLADLGMAFSSIHSKEYADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKA 224
           RP+A FL  + + F+ +  KE   ++ K G   D    P+G+G F    +    +  F+ 
Sbjct: 164 RPDATFLHVMALNFAHVVPKE---EVEKHG--ADFGKNPVGSGAFKLAEWTLGQRLVFER 218

Query: 225 NPDYF-RGKPAVDPLILAISTDNNVRLQKLKANECQIALFPKPDDIPSIK-----KDPNL 278
             DY+  G P +D +   +  +  V L +L+  E  +      D IP  K      DPN 
Sbjct: 219 FTDYWNEGLPKLDRITFEVGQEPVVALLRLQNGEIDV----PGDGIPPAKFVEVTNDPNF 274

Query: 279 K--VDELAAMTTSYTALNTTHKYMSDARVRHAINIAFDKAGYTEALFGKGNAVVGTGPYP 336
           K  +     + T Y  +N          VR A+N+A +K      +   G AV    P P
Sbjct: 275 KDLIIRGGQLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRII--NGRAVAANQPLP 332

Query: 337 PTLLGFNEKLKNPPRDLDKARALLKEAGVPEGTEFTLFTRNGGGPTNPNPMLGAQRMQAD 396
           P++ G+ +       D + A+ LL++AG+ +G    L+  N    T+P P + AQ +Q D
Sbjct: 333 PSMPGYAKDYAGYAYDPEGAKKLLEQAGLGDGFSTELYVMN----TDPQPRI-AQAIQQD 387

Query: 397 LAQIGLKVNIKVMEWGEMLKRAKNGEHD---MVSAG---WVGDNGDPDNFLTPNLSC-DA 449
           L  IG+  +IK +    ++  A  GE +   M+ +G   W+ D  DP NF  P L C  A
Sbjct: 388 LKAIGITASIKSLAQANVI--AAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGCGGA 445

Query: 450 AKNGENYARWCNKEFQDLIDKARAIAEPAQRAALYEQAQDVFDK---DQPWLPMAYPKLF 506
              G N++ +CN+E      +A AIA+PA+ A      +D++ K   D PW P+   + F
Sbjct: 446 VPGGWNWSWYCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERF 505

Query: 507 TAMRKNVEG 515
           T   + + G
Sbjct: 506 TIRSERIGG 514