Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 922 a.a., DNA polymerase I (RefSeq) from Shewanella sp. ANA-3

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 545/925 (58%), Positives = 680/925 (73%), Gaps = 14/925 (1%)

Query: 5   PLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFDAKGG 64
           PLVLVDGSSYLYRA++A P LT SKG  TGAV GV+NML+SL  +Y  S  AVVFDAKG 
Sbjct: 8   PLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAVVFDAKGK 67

Query: 65  TFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSSAA 124
           TFR+++Y EYKA+RP MPDD+R QIEPLH+ + ALG PL+ + GVEADDVIGT+AR ++ 
Sbjct: 68  TFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGTIARQASR 127

Query: 125 ADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALMGDSS 184
            +R V+ISTGDKDMAQLVD +ITL+NTMT + M  E V  K+GV P++IID+LALMGD +
Sbjct: 128 ENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFLALMGDKA 187

Query: 185 DNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREMAFLS 244
           DNIPG+PG+G KTA  +L G  G +  L  + + V  L  RGAKT+ AK+ ++ +M  LS
Sbjct: 188 DNIPGLPGVGEKTALAMLTGA-GSVANLLAEPEKVTELGFRGAKTMAAKIIDNADMLKLS 246

Query: 245 YQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKAAPAV 304
           Y+LATIK DV L+    +L     DR++L++ Y  +EFK W  E+  +     + A    
Sbjct: 247 YELATIKTDVELEQDWHELTAKPADRDELIKCYGEMEFKRWLAEVLDNKAPATVAAKAET 306

Query: 305 EAVVETVAPT---EASYTTILDQATFDIWLKKLNEATLFAFDTETTGIDAQQAQLVGVSF 361
               E  AP+   E  Y TIL +A  D W+ KL +A L A DTETT +D   A+LVG+SF
Sbjct: 307 TETQEESAPSVTIETQYDTILTEAQLDEWIAKLKQAPLMAVDTETTSLDYMVAELVGLSF 366

Query: 362 AVQPHEAAYIPLTHSYIGAPQQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNILANCAI 421
           AV+  +AAY+PL H Y+GAPQQLD+ T L  L+PLLED    KVGQ+ K+D+++LAN   
Sbjct: 367 AVEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPLLEDAKIKKVGQNLKYDISVLANA-- 424

Query: 422 GGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQLT 481
                 GI ++G+ FDTMLESYV NS A+RHDMD LA KYL +  +AF+DIAGKGAKQLT
Sbjct: 425 ------GIKLQGVVFDTMLESYVFNSIASRHDMDGLALKYLGHKNIAFEDIAGKGAKQLT 478

Query: 482 FDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLASVLTDIEIPLVPVLARIERQGA 541
           F+QI LE A PYAAEDADITLRLHQ L+ +L     LASV TDIE+PL+ +L+ IERQG 
Sbjct: 479 FNQIPLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIELPLIQILSDIERQGV 538

Query: 542 LVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGKG 601
            +D  LLG QS EL  K+ ELE +A++IAGE+FNL SPKQL  + +EKLG PV+KKT KG
Sbjct: 539 FIDSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVIKKTPKG 598

Query: 602 QASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVA 661
             STAEEVL +LA D +PLPKV++++RS++KLKSTYTD+LP  +N +TGR+HTSYHQA A
Sbjct: 599 APSTAEEVLVELALD-FPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSYHQANA 657

Query: 662 ATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSKDEGLM 721
           ATGRLSSS+PNLQNIP+RT EGRRIRQAF+AP+G K+LAADYSQIELRIMAHLS+D GL+
Sbjct: 658 ATGRLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQDAGLL 717

Query: 722 NAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKTA 781
            AF +  D+H ATAAEVF  +   VTS+QRR AKA+NFGLIYGM A  L + + +    A
Sbjct: 718 KAFAEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEA 777

Query: 782 KAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTAI 841
           + YID YFARYPGV  YME TRA AA+ GYV T FGRRLYLP+I       R AAER AI
Sbjct: 778 QTYIDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAI 837

Query: 842 NAPMQGTAADIIKKAMVRVDNWL-TESGLDAKVILQVHDELVVEVREDLVAQVSEKIREH 900
           NAPMQGTAADIIKKAM+ + +W+ T++  +  +I+QVHDELV EV  D    +  K+ E 
Sbjct: 838 NAPMQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAETLKLKVCEL 897

Query: 901 MSAAAQLDVPLLVEVGVGNNWDEAH 925
           M+ AA LDV LL E G+G+NWD+AH
Sbjct: 898 MAKAANLDVELLAEAGIGDNWDQAH 922