Pairwise Alignments

Query, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 4e-66
 Identities = 117/280 (41%), Positives = 177/280 (63%), Gaps = 1/280 (0%)

Query: 17  PSPYKEFWQAFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGG 76
           P+ ++ FW++F  N  A+ GL  +L I    I +PW+AP++P + +   LL PP+W   G
Sbjct: 13  PTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP-QMHSSVLLLPPSWEPEG 71

Query: 77  QMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIM 136
            + + LGTD+LGRD+LSRLI GS  S+   +   +++ + G  +G  AG    LL  T+ 
Sbjct: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131

Query: 137 RLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 196
            ++D ++++PSLLLA+  VA LG G  N ++AI +  +P ++R    AV  E+ +DYV A
Sbjct: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMA 191

Query: 197 ARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 256
           ARL GA    L++ ++ PN +  ++ + T++ S AILD  ALGFLGLG Q P+ EWG ML
Sbjct: 192 ARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAML 251

Query: 257 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALD 296
             + + I  A W V+LPGL I+ +V+ INL+GDG R AL+
Sbjct: 252 GDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291