Pairwise Alignments

Query, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

Subject, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  227 bits (579), Expect = 2e-64
 Identities = 119/275 (43%), Positives = 162/275 (58%), Gaps = 6/275 (2%)

Query: 24  WQAFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLG 83
           W  F +N  AV GL   L +V  A FAPW+APH+P        L PP+          LG
Sbjct: 40  WLVFIRNPLAVIGLAIFLCLVILATFAPWIAPHDPLFGTLSERLLPPS------AGHWLG 93

Query: 84  TDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIML 143
           TD+ GRD+ SR++ GSR +L+I     + +   G+L+G  AGF   ++   +MRL D  L
Sbjct: 94  TDQQGRDIWSRIVFGSRTTLMIIFLVAITAAPVGLLIGTTAGFVGGIVEAALMRLTDAFL 153

Query: 144 ALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAG 203
           A P L+LA+A  A LG GL N V+AIA+ + P Y R+ RA  +     D+V AAR+ G+ 
Sbjct: 154 AFPKLILALAFAAALGAGLENAVLAIALTAWPPYARIARAETLAVRRTDFVAAARMCGSS 213

Query: 204 LPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYI 263
             R++   ++P C+  L+V+ +L  +  IL AA LGFLGLGV PP PEWG M++  R  I
Sbjct: 214 PLRILIGQIMPMCIPSLVVRVSLDMAGVILIAAGLGFLGLGVAPPQPEWGAMVSEGRSQI 273

Query: 264 ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 298
              WWV + PG+ I +  L  NL+GDGLRD LDPK
Sbjct: 274 LAQWWVCTYPGIAICIVSLGFNLLGDGLRDVLDPK 308