Pairwise Alignments

Query, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

Subject, 296 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  229 bits (583), Expect = 8e-65
 Identities = 118/261 (45%), Positives = 172/261 (65%), Gaps = 7/261 (2%)

Query: 40  MLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDLLSRLIQGS 99
           + L+V  AIFAPW+APH+P +      L PP+       +FLLGTD  GRDLLSR+I G 
Sbjct: 37  LTLVVLMAIFAPWLAPHDPVKLAPALRLKPPS------AEFLLGTDAYGRDLLSRIIYGG 90

Query: 100 RLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSLLLAVAIVAILG 159
           R+SLLIG+ S ++++  G+++GL AGFF R +   +MR+MD ++A+PS+LLA+A+V++ G
Sbjct: 91  RVSLLIGIGSAIVAIAIGLVIGLVAGFF-RWVDAVMMRVMDGLMAIPSVLLAIAVVSLSG 149

Query: 160 PGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAP 219
             L   +IAI I  +P   RL R+ V+      YV AA   G+ LP++M   ++PN +AP
Sbjct: 150 ASLTTVLIAITIPEIPRVARLVRSVVLTAREEPYVEAAISVGSSLPKIMVRHLMPNTVAP 209

Query: 220 LIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILL 279
           LIVQ T   +SAIL  A L FLG G+ P TP WG ++A  R Y +    ++  PGL + +
Sbjct: 210 LIVQGTYIAASAILTEAILSFLGAGISPETPTWGNIMAEGRAYFQIKPMLIFWPGLLLSI 269

Query: 280 SVLAINLMGDGLRDALDPKLK 300
           ++L++NL+GD  RDALDP++K
Sbjct: 270 AILSVNLIGDAARDALDPRMK 290