Pairwise Alignments

Query, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  250 bits (639), Expect = 5e-71
 Identities = 131/257 (50%), Positives = 178/257 (69%), Gaps = 2/257 (0%)

Query: 3   LLEIKNLNVRFGDKT-AVPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHP-G 60
           LLE+K+L V F     A     G+   VD GE L I+GESGSGKSV+  A+MGLI+ P G
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 61  IVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLK 120
            + A ++ + G+D+  LS  +RR + G+ +AM+FQDP++ LNP YT+G+Q+EEV  +H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 121 MSGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180
            SG +AR+RAIE+L +V IP    R+D YPHQ SGG  QR+ I MAIA  P++LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 181 TALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQL 240
           TALDV++QAQI+ELL  LQ E  + +++ITHDL V A  A RV VM +G+ VE G+   +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 241 FDIPAHPYSEALLKAIP 257
           F+ PAH Y+  L+ A+P
Sbjct: 246 FENPAHSYTRTLINALP 262



 Score =  163 bits (412), Expect = 1e-44
 Identities = 104/265 (39%), Positives = 148/265 (55%), Gaps = 17/265 (6%)

Query: 3   LLEIKNLNVR-------FGDKTAVPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGL 55
           +LE+KN++         F     +  V  L   V  GE + IVGESGSGKS     L+GL
Sbjct: 280 ILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL 339

Query: 56  IEHPGIVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVL 115
            E  G    +AL F G+D+LK+  +Q      K + MVFQDP +++NP  TV   + E  
Sbjct: 340 NEASG---GEAL-FHGRDVLKMDRKQLLAFRRK-VQMVFQDPYSSMNPRMTVFDIVSEPW 394

Query: 116 RLHLKMSGKQA-RKRAIELLEKVEI-PGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKL 173
           R+H  +  K   R R  ELL  V + P  A R   YPHQ SGG  QR+AIA A+A +P+L
Sbjct: 395 RIHKDILEKTRWRDRVTELLGLVGLNPEHAKR---YPHQFSGGQRQRIAIARALACDPEL 451

Query: 174 LIADEPTTALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVE 233
           ++ DE  +ALDV++Q Q+++LL  L+    +  + ITHDL +V   A R+ VM +G+ VE
Sbjct: 452 VVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVE 511

Query: 234 VGQVPQLFDIPAHPYSEALLKAIPE 258
                ++F  P H Y+  L+ A P+
Sbjct: 512 HATTEEIFRNPQHAYTRQLINATPK 536