Pairwise Alignments

Query, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  270 bits (691), Expect = 6e-77
 Identities = 143/300 (47%), Positives = 189/300 (63%), Gaps = 1/300 (0%)

Query: 3   LLEIKNLNVRF-GDKTAVPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHPGI 61
           LL ++NL   F      +  VDG+  +V  GE  A++GESG GKS T +AL+ L+ + G 
Sbjct: 4   LLSVRNLKAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLLPNAGR 63

Query: 62  VTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLKM 121
           +    +  +G+++L L     R   G   AM+FQ+P T+LNP  T+G QI E L  H  M
Sbjct: 64  IQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERHRGM 123

Query: 122 SGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
            G+ AR+ A+ LL  V I     R++ YP QLSGGM QR  IA+A+AGEP+LLIADEPTT
Sbjct: 124 KGEAARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLIADEPTT 183

Query: 182 ALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQLF 241
           ALDVTIQAQI++LL  LQ E+ MG++LITHDL VVA +A RV VMYAG+ VE     + F
Sbjct: 184 ALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETAPRQEFF 243

Query: 242 DIPAHPYSEALLKAIPEHSLGATRLATLPGIVPGRYDRPQGCLLSPRCPYVQENCRTQRP 301
             P HPY++ L  A+P+      +LAT+PG VPG    P GC  +PRCP   + CR + P
Sbjct: 244 ASPRHPYTQKLFAALPDLGQRGAQLATIPGQVPGLAAMPAGCRFAPRCPVAMDRCRLESP 303



 Score =  217 bits (552), Expect = 7e-61
 Identities = 130/304 (42%), Positives = 175/304 (57%), Gaps = 16/304 (5%)

Query: 19  VPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHPGIVTADALNFDGKDMLKLS 78
           V  VDG+ + + +G  LA+VGESG GK+    A++ L+   G V       DG+++L L 
Sbjct: 375 VKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVLRLLPATGSV-----RLDGRELLGLP 429

Query: 79  NRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEE-VLRLHLKMSGKQARKRAIELLEKV 137
            R+ + +  + + MVFQDP  +LNP  TVG  IEE +  L +  S  + R     LLE V
Sbjct: 430 ERELKPL-RRRMQMVFQDPFASLNPRLTVGEIIEEGMTALRVAASRDERRAALAALLESV 488

Query: 138 EIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTTALDVTIQAQIMELLLA 197
            +P  A  +  YPH+ SGG  QR+AIA A+A +P+LL+ DEPT+ALDV++QAQI+ LL  
Sbjct: 489 GLPAEA--LGRYPHEFSGGQRQRIAIARALAVQPELLVCDEPTSALDVSVQAQILNLLRR 546

Query: 198 LQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQLFDIPAHPYSEALLKAIP 257
           LQ+E  +  + ITH+ AVV   A  V VMY G+ VE G V Q+   P HPY+ ALL A+P
Sbjct: 547 LQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQQVLAAPCHPYTRALLSAVP 606

Query: 258 EHSL-GATRLATLPGIVPGRYDRPQGCLLSPRCPYVQENCRTQRPDLDPKTNS---LARC 313
           E  L G   +  LPG  P     PQGC   PRC    E CR + P   P T +   + RC
Sbjct: 607 EPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQASERCRQEYP--APSTQAGGVVVRC 664

Query: 314 -FYP 316
             YP
Sbjct: 665 HLYP 668