Pairwise Alignments

Query, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 333 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  263 bits (673), Expect = 3e-75
 Identities = 141/326 (43%), Positives = 203/326 (62%), Gaps = 15/326 (4%)

Query: 3   LLEIKNLNVRFGDK-TAVPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHPGI 61
           LL++ NL V+F  + TA+  V+ +  ++ KGE L +VGESG+GKSVT  +++ L+  PG 
Sbjct: 4   LLDVSNLTVKFALRDTALTAVNDVSFTLAKGERLGLVGESGAGKSVTGFSILNLVSKPGF 63

Query: 62  VTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLKM 121
           +   ++ F+GKD+ +      R I G  ++M+FQDPM  LNP  TVG Q+ E +  H K+
Sbjct: 64  IAGGSVLFEGKDLTRADAETLRDIRGNRISMIFQDPMMTLNPVLTVGTQMIETILAHKKV 123

Query: 122 SGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
           + K+A   A++ L KV IP    R+  YPH+ SGGM QR+ IA+A+   P L+IADEPTT
Sbjct: 124 TRKEAEAIALDKLRKVYIPSPERRLAQYPHEFSGGMRQRIVIAIALLTSPSLIIADEPTT 183

Query: 182 ALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQLF 241
           ALDVTIQA+IM+LLL L + ++MGL+LITHDL VV++  Q++ VMYAG  VE+G    + 
Sbjct: 184 ALDVTIQAEIMDLLLELCQSEDMGLILITHDLGVVSQVTQKIAVMYAGGIVEMGDTAMVV 243

Query: 242 DIPAHPYSEALLKAIPEHSLGA-------------TRLATLPGIVPGRYDRPQGCLLSPR 288
             P HPY+  LL A+P+ +  A              RL  +PG +P   D P+GC  + R
Sbjct: 244 GEPLHPYTRGLLGALPQCADKADCGLEDVAAPRVRRRLNQIPGSMPSLSDVPRGCPFNNR 303

Query: 289 CPYVQENCRTQRPDLDPKTNS-LARC 313
           C   +  C T RP L+ K++  +A C
Sbjct: 304 CELCETVCTTTRPLLEVKSDGRMAAC 329