Pairwise Alignments

Query, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 88/242 (36%), Positives = 128/242 (52%), Gaps = 27/242 (11%)

Query: 9   LIGGAVVVALLALLV--HWIGINTIELYRDDL-LFYLQA--HLILVLVSMLAALVVGIPA 63
           L+   V+V    +LV   W  ++ ++ Y +   LF+ +A  H+ L L S+ AA +VG+P 
Sbjct: 149 LVFAGVLVLAGGMLVTGRWDDLSIVKEYANRADLFWTEAGRHVTLALGSLAAATIVGLPL 208

Query: 64  GILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAI----------------ALGVLGIGSG 107
           GIL  R   +      + + N   T+P +A+  I                A+G+ GIG+ 
Sbjct: 209 GILCHRVERLRAG--VLNVLNAIQTIPSIALFGILIAPLGWIAANVPGAAAIGIRGIGAA 266

Query: 108 PAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIGGV 167
           PA  ALFL SLLP+V NT  GL  V  +  +AA GIGMT RQ L  +E P A P+I+ G+
Sbjct: 267 PAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILTGI 326

Query: 168 RVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALL----ALLLDGLV 223
           R+ L  N+G A +A LIG    G  +F G+       +LLGA  T +L    A++LD L+
Sbjct: 327 RIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLGAIPTVVLAFTAAIVLDALI 386

Query: 224 TM 225
            M
Sbjct: 387 EM 388